Gene
| Gene Model ID | pfu_aug1.0_2975.1_59088 |
|---|---|
| Locus | scaffold2975.1 : 813 ... 16955 : - |
| To GenomeBrowser | scaffold2975.1:813..16955 |
| Genes list of scaffold | scaffold2975.1 |
| Synonym | pfu_aug2.0_1359.1_31640 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2975.1_59088.t1 | 2 | 1 | EF-hand_7 | 36 | 75 | 1.3e-14 | 54.0 | 0.013 | 37.0 | 4.5 |
| pfu_aug1.0_2975.1_59088.t1 | 4 | 1 | EF-hand_6 | 36 | 46 | 5.7e-09 | 35.1 | 0.6 | 1800.0 | -0.7 |
| pfu_aug1.0_2975.1_59088.t1 | 4 | 2 | EF-hand_6 | 64 | 78 | 5.7e-09 | 35.1 | 0.18 | 530.0 | 0.9 |
| pfu_aug1.0_2975.1_59088.t1 | 2 | 1 | EF-hand_8 | 64 | 112 | 4.1e-08 | 32.7 | 1.2e-07 | 0.00037 | 20.0 |
| pfu_aug1.0_2975.1_59088.t1 | 3 | 1 | EF-hand_1 | 67 | 78 | 2.4e-12 | 45.1 | 0.092 | 270.0 | 1.2 |
| pfu_aug1.0_2975.1_59088.t1 | 3 | 2 | EF-hand_1 | 86 | 113 | 2.4e-12 | 45.1 | 4.5e-11 | 1.3e-07 | 30.3 |
| pfu_aug1.0_2975.1_59088.t1 | 2 | 2 | EF-hand_7 | 87 | 142 | 1.3e-14 | 54.0 | 8.1e-16 | 2.4e-12 | 46.7 |
| pfu_aug1.0_2975.1_59088.t1 | 4 | 3 | EF-hand_6 | 87 | 113 | 5.7e-09 | 35.1 | 2.4e-09 | 7.2e-06 | 25.4 |
| pfu_aug1.0_2975.1_59088.t1 | 2 | 1 | EF-hand_5 | 88 | 107 | 1.6e-09 | 36.6 | 9.9e-10 | 2.9e-06 | 26.3 |
| pfu_aug1.0_2975.1_59088.t1 | 2 | 2 | EF-hand_8 | 114 | 140 | 4.1e-08 | 32.7 | 4.1e-06 | 0.012 | 15.1 |
| pfu_aug1.0_2975.1_59088.t1 | 3 | 3 | EF-hand_1 | 122 | 142 | 2.4e-12 | 45.1 | 8.0e-07 | 0.0024 | 17.0 |
| pfu_aug1.0_2975.1_59088.t1 | 2 | 2 | EF-hand_5 | 124 | 140 | 1.6e-09 | 36.6 | 0.00023 | 0.69 | 9.3 |
| pfu_aug1.0_2975.1_59088.t1 | 4 | 4 | EF-hand_6 | 127 | 142 | 5.7e-09 | 35.1 | 0.013 | 37.0 | 4.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2975.1_59088.t1 | gi|156388256|ref|XP_001634617.1| | predicted protein [Nematostella vectensis] | 2.0e-39 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2975.1_59088.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2975.1_59088.t1 atgtcacgacggtcaagtcgggcctctctatcagacggagagtttatgctggagtgtaaggcagcgtatctgtctgtata tgatgacatcaaggatgaaatcaaatccaaggatgaactagttcaagtcttgcaacaagcaggcagaaatccctccacaa ggcttctggctaagtactggacctcaagtacagatgaattaacctacgacgactttgttgatatctgtcgcaaagaacct gttaccacaacagatgatctgatgaaagctttccgtaaaatcgacatcaacggagatggatatatttctttagacgaact gttcaaactgatgacaactaaaggagaaaagatgagtcgaagtgaggtgaaaaagatgattgatgaagtagatgaaaaca gagatggaaagctggattatggagagagagtgtttaattattaccgatgtggattcttacggaatctcaattttcagggg ttttacagagcgacccatgtcagcgtccgcaagatctacagcttcagccaaaattcagctttgatccagaaatctgttca attgccttttctgacgaccaggttcctatgcatgtgtcgttgttgtctgtgggaatctgttttgttattaagatttcatt ttgagttaagatattacatgatcgatacaggtggcagaaaagaaaccgaagaacctgttgccaaagctgtcagtgcttca cgtacgtccttaaaatctaaccatagtgaaaataaagatgtgcaagaaaaagatgagaaagtggaagatgaagaagaaat caaggaggatattaaggcatccagaacctctttgaagtcaaatagaagtgtaacttcaagaaagacagtagaagaaaact taaccaaagatgatgtgccttcaaaagagctgacagcgtcaagagcatctctgaaatcaaataagagtagttcttcaaga aaagcatctgtagaaaatagtgagacagcaaaagaggatgtctctgcatctaaagcatctctgaaaagcacatcatctag gaaagcatcagatcctgagacctcagaggttgtaaaagaggaggtatctgcatcaagaacctctcttaaatctaacaaaa gcacctcatcaaaaaaagcgtccgaggaagtacaagaaactactgcaaaggaggatgtcagctcttctaaagtatccctg agaagtaacaggagcatcaaggggctgattgatacggagaccaatactaagctgttagcaagtagaacatctctgaggag caataaaagtctgtcatccaaagtgacagacaacaaagaggggagtaaggaggggaaaatagaggacaaaagtgatgata gtgacagtactgattctgatattgtaataggaacgccacgcccatctgtccggagcgatgaccgtttctctgcgcataga tactctttacactctgtaggggagagaccaagtactccaaagaagcgaaccagtaaggcataa |
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Protein
| Protein ID | pfu_aug1.0_2975.1_59088.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2975.1_59088.t1 MSRRSSRASLSDGEFMLECKAAYLSVYDDIKDEIKSKDELVQVLQQAGRNPSTRLLAKYWTSSTDELTYDDFVDICRKEP VTTTDDLMKAFRKIDINGDGYISLDELFKLMTTKGEKMSRSEVKKMIDEVDENRDGKLDYGERVFNYYRCGFLRNLNFQG FYRATHVSVRKIYSFSQNSALIQKSVQLPFLTTRFLCMCRCCLWESVLLLRFHFELRYYMIDTGGRKETEEPVAKAVSAS RTSLKSNHSENKDVQEKDEKVEDEEEIKEDIKASRTSLKSNRSVTSRKTVEENLTKDDVPSKELTASRASLKSNKSSSSR KASVENSETAKEDVSASKASLKSTSSRKASDPETSEVVKEEVSASRTSLKSNKSTSSKKASEEVQETTAKEDVSSSKVSL RSNRSIKGLIDTETNTKLLASRTSLRSNKSLSSKVTDNKEGSKEGKIEDKSDDSDSTDSDIVIGTPRPSVRSDDRFSAHR YSLHSVGERPSTPKKRTSKA |
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