Gene
| Gene Model ID | pfu_aug1.0_29780.1_55316 |
|---|---|
| Locus | scaffold29780.1 : 1 ... 7237 : - |
| To GenomeBrowser | scaffold29780.1:1..7237 |
| Genes list of scaffold | scaffold29780.1 |
| Synonym | pfu_aug2.0_1394.1_15009 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_29780.1_55316.t1 | 1 | 1 | FAM177 | 29 | 128 | 1.5e-32 | 112.0 | 1.3e-36 | 1.9e-32 | 111.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_29780.1_55316.t1 | gi|47222688|emb|CAG00122.1| | unnamed protein product, partial [Tetraodon nigroviridis] | 3.0e-24 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_29780.1_55316.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_29780.1_55316.t1 cactcttacatgtacatgtacatgtaaatatatatataccattagatattttatttcagaattctgacttcacgaacatt cctttagagggtgacagtacacagaaaaagaagaaagtaccacggaggataatacactgtagtgatggtatcctcgagga atattctactgatgaggaagaggacaagcctccccctcctcctccagtaaatcctagagacttaacatggttgccatggt tttggtattacttggttacaatggccagaggcactttgtctgttgcagacacttgtggtgaaaaattagcatggttcttt ggaatcacgtcccctaaataccagtatgctatagatgaatactacaggttgaaagctgaggctaaaagatag |
|
Protein
| Protein ID | pfu_aug1.0_29780.1_55316.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_29780.1_55316.t1 LLHVHVHVNIYIPLDILFQNSDFTNIPLEGDSTQKKKKVPRRIIHCSDGILEEYSTDEEEDKPPPPPPVNPRDLTWLPWF WYYLVTMARGTLSVADTCGEKLAWFFGITSPKYQYAIDEYYRLKAEAKR |
|