Gene
Gene Model ID | pfu_aug1.0_29881.1_47955 |
---|---|
Locus | scaffold29881.1 : 1 ... 7226 : - |
To GenomeBrowser | scaffold29881.1:1..7226 |
Genes list of scaffold | scaffold29881.1 |
Synonym | pfu_aug2.0_300.1_00562 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_29881.1_47955.t1 | 1 | 1 | Rep_fac_C | 3 | 90 | 9.4e-26 | 89.6 | 7.2e-30 | 1.1e-25 | 89.4 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_29881.1_47955.t1 | gi|224076092|ref|XP_002192072.1| | 8.99998e-41 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
maleGonad | 1 |
pearlSac | 1 |
Transcript
Transcript ID | pfu_aug1.0_29881.1_47955.t1 |
---|---|
Definition | - |
>pfu_aug1.0_29881.1_47955.t1 gtatgcgacgagccgcatcctgtacttatacaagacatgcttcagcattgtgtgaatggtaacatagacgaggcgtataa aaccatggcccatctctggagactgggttactctgctgaggatatcatcactatagtgttcagagtgtgtaaaaatcata aaatgccagaattcttacgacttgagtttataaaggagattggatttacccacatgcggatcgtggaaggtgtaagttct ctattacaaatgtcaggacttctggctaggctgtgtaaaataacggcagatccttctacaaactctataccgagtgggga atga |
Protein
Protein ID | pfu_aug1.0_29881.1_47955.t1 |
---|---|
Definition | - |
>pfu_aug1.0_29881.1_47955.t1 VCDEPHPVLIQDMLQHCVNGNIDEAYKTMAHLWRLGYSAEDIITIVFRVCKNHKMPEFLRLEFIKEIGFTHMRIVEGVSS LLQMSGLLARLCKITADPSTNSIPSGE |