Gene
| Gene Model ID | pfu_aug1.0_299.1_50771 |
|---|---|
| Locus | scaffold299.1 : 7586 ... 18735 : + |
| To GenomeBrowser | scaffold299.1:7586..18735 |
| Genes list of scaffold | scaffold299.1 |
| Synonym | pfu_aug2.0_100.1_00243 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_299.1_50771.t1 | 1 | 1 | MIT | 36 | 112 | 3.3e-10 | 39.7 | 1.6e-13 | 8.0e-10 | 38.4 |
| pfu_aug1.0_299.1_50771.t1 | 1 | 1 | Senescence | 368 | 556 | 2.29995e-41 | 141.4 | 9.80909e-45 | 4.69996e-41 | 140.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_299.1_50771.t1 | gi|260833324|ref|XP_002611607.1| | hypothetical protein BRAFLDRAFT_117149 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_299.1_50771.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_299.1_50771.t1 atggcagaagctatgatgtctgaaagagagaggacacggcgacctccaagacctcctgctcctaatataaggtcagaggt cactgacatggaaacactacacaaatatcatgataaagcttataaactcattaacaaaggtctaagtctggacgaggaag gaaagactgcagaggcaataacaagttataatgatggtttgagatatataagtaagggacttgatatgaatgtggaaaat ttcaaatgttctgaggacgagaaaaatgaaggtaaaatgatgcagcagaaaatgatgaaaacacgtttacaaattgaata cagacttcaaactcttgaaagaactcaaagcttgaatggcattcctcaagggccagaatcgatgggcgttacattgccgt catatgaggaggccatatcatcaccaaattccttaagcgacgaggcgttccaaatgctaggagattctattatgacagtg gatgaatcacaggacaatagcatggtggcaaacgctacagaaatgatgtgcattccggaaggtgttcaaatatttttcat atcccccacggggtacgtcagtgctccatcttacccgtcctctctgaggatgttcaaattcacagacgaggcacagagag acacgggtgacacagctccacctgcctttatgcaggtagataactggtactatcccttagtaccaggtacttcaccggcc ctacatgccagtaacggagcttacatattccctgatacaatatctcaggaagaaggatcggctgttggcctgttgttacc taatgaccttcaccctgcccagagacaacagtttgagcggcttctgaacagttttaccaaccttcgtgagcagcatccct caccgtcaatggaatccctaccctctgccccacccatggaggaagttatggacgtaccacacccagcaacaagaggggaa aagacagctcctaaaagtaggatggctggtgagagaatggaagacgaagaagttcgggatgtcagatttggtgaacgtag aaaggagactgccaaagaggaaggggaagatacatctacaagttcgaaaatagcaaggggaataactgtggcctctgaat ggatctcctggggtgtaggtaaaggttcagaaaaggccagcagtctgttcagagcgggctcggagaagatcaaggctagg ctcacccctgaagataaaccggcaaacgtcgatcctaaagtacagaaaagtattgagtatgctagaaagggaacccatgt agcagtcactgtcagctcttttcttgtgacaaaattaggtgaagcaacgaaagctattgcaaaggaagtggcgcctcatc ttaggaagcaaggggaaaaactcctgccgaaatctgtgaagcaacaatcaatgagcgataatacacaatcaaaacttgat ggagtcatagaggtggcagcttctggggtcaaaggttttggtgtggtatacatgtcactggaggctgcagctaaagctct agccaggaacatggctaatgagacagtatcagtggtggatcacaaatatggtagtcaggcagcaaagttaacagacaatg cactatttgctgttggtaatgttgccatgacagccaataatgttgacaactttggggtcaaggccatcgctaagagagca gcaaaggatgctgggaaggaagtagttaaagacntacatgtatga |
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Protein
| Protein ID | pfu_aug1.0_299.1_50771.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_299.1_50771.t1 MAEAMMSERERTRRPPRPPAPNIRSEVTDMETLHKYHDKAYKLINKGLSLDEEGKTAEAITSYNDGLRYISKGLDMNVEN FKCSEDEKNEGKMMQQKMMKTRLQIEYRLQTLERTQSLNGIPQGPESMGVTLPSYEEAISSPNSLSDEAFQMLGDSIMTV DESQDNSMVANATEMMCIPEGVQIFFISPTGYVSAPSYPSSLRMFKFTDEAQRDTGDTAPPAFMQVDNWYYPLVPGTSPA LHASNGAYIFPDTISQEEGSAVGLLLPNDLHPAQRQQFERLLNSFTNLREQHPSPSMESLPSAPPMEEVMDVPHPATRGE KTAPKSRMAGERMEDEEVRDVRFGERRKETAKEEGEDTSTSSKIARGITVASEWISWGVGKGSEKASSLFRAGSEKIKAR LTPEDKPANVDPKVQKSIEYARKGTHVAVTVSSFLVTKLGEATKAIAKEVAPHLRKQGEKLLPKSVKQQSMSDNTQSKLD GVIEVAASGVKGFGVVYMSLEAAAKALARNMANETVSVVDHKYGSQAAKLTDNALFAVGNVAMTANNVDNFGVKAIAKRA AKDAGKEVVKDXHV |
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