Gene
| Gene Model ID | pfu_aug1.0_299.1_50774 |
|---|---|
| Locus | scaffold299.1 : 54828 ... 66925 : - |
| To GenomeBrowser | scaffold299.1:54828..66925 |
| Genes list of scaffold | scaffold299.1 |
| Synonym | pfu_aug2.0_100.1_00244 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_299.1_50774.t1 | 13 | 1 | Cadherin | 20 | 63 | 0.0 | 568.8 | 7.7e-12 | 2.9e-08 | 33.8 |
| pfu_aug1.0_299.1_50774.t1 | 13 | 2 | Cadherin | 78 | 177 | 0.0 | 568.8 | 3.7e-24 | 1.4e-20 | 73.3 |
| pfu_aug1.0_299.1_50774.t1 | 13 | 3 | Cadherin | 200 | 294 | 0.0 | 568.8 | 1.4e-16 | 5.1e-13 | 49.0 |
| pfu_aug1.0_299.1_50774.t1 | 13 | 4 | Cadherin | 309 | 399 | 0.0 | 568.8 | 6.5e-21 | 2.4e-17 | 62.9 |
| pfu_aug1.0_299.1_50774.t1 | 6 | 1 | Cadherin_2 | 312 | 374 | 1.3e-11 | 43.8 | 0.012 | 44.0 | 3.7 |
| pfu_aug1.0_299.1_50774.t1 | 13 | 5 | Cadherin | 414 | 508 | 0.0 | 568.8 | 6.3e-23 | 2.3e-19 | 69.4 |
| pfu_aug1.0_299.1_50774.t1 | 6 | 2 | Cadherin_2 | 459 | 479 | 1.3e-11 | 43.8 | 0.0028 | 10.0 | 5.7 |
| pfu_aug1.0_299.1_50774.t1 | 13 | 6 | Cadherin | 522 | 551 | 0.0 | 568.8 | 8.0e-05 | 0.3 | 11.3 |
| pfu_aug1.0_299.1_50774.t1 | 13 | 7 | Cadherin | 611 | 647 | 0.0 | 568.8 | 7.4e-10 | 2.8e-06 | 27.5 |
| pfu_aug1.0_299.1_50774.t1 | 13 | 8 | Cadherin | 661 | 756 | 0.0 | 568.8 | 1.7e-19 | 6.4e-16 | 58.3 |
| pfu_aug1.0_299.1_50774.t1 | 6 | 3 | Cadherin_2 | 661 | 738 | 1.3e-11 | 43.8 | 0.00021 | 0.78 | 9.3 |
| pfu_aug1.0_299.1_50774.t1 | 13 | 9 | Cadherin | 771 | 799 | 0.0 | 568.8 | 0.0025 | 9.2 | 6.6 |
| pfu_aug1.0_299.1_50774.t1 | 13 | 10 | Cadherin | 816 | 907 | 0.0 | 568.8 | 7.0e-23 | 2.6e-19 | 69.2 |
| pfu_aug1.0_299.1_50774.t1 | 6 | 4 | Cadherin_2 | 821 | 881 | 1.3e-11 | 43.8 | 0.0028 | 10.0 | 5.7 |
| pfu_aug1.0_299.1_50774.t1 | 13 | 11 | Cadherin | 924 | 1003 | 0.0 | 568.8 | 7.7e-17 | 2.9e-13 | 49.8 |
| pfu_aug1.0_299.1_50774.t1 | 6 | 5 | Cadherin_2 | 967 | 984 | 1.3e-11 | 43.8 | 0.009 | 33.0 | 4.1 |
| pfu_aug1.0_299.1_50774.t1 | 13 | 12 | Cadherin | 1037 | 1112 | 0.0 | 568.8 | 8.2e-14 | 3.0e-10 | 40.1 |
| pfu_aug1.0_299.1_50774.t1 | 13 | 13 | Cadherin | 1129 | 1216 | 0.0 | 568.8 | 2.7e-10 | 9.8e-07 | 28.9 |
| pfu_aug1.0_299.1_50774.t1 | 6 | 6 | Cadherin_2 | 1168 | 1193 | 1.3e-11 | 43.8 | 0.0043 | 16.0 | 5.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_299.1_50774.t1 | gi|158297299|ref|XP_317558.4| | AGAP007924-PA [Anopheles gambiae str. PEST] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_299.1_50774.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_299.1_50774.t1 atggcgttgtcagtaaattactatagtatagacactggcttacctctttcagtgctcaatacaccagaaataaaactcat tgggaatttggacagggaggaaagggataaatatcaactgaatatatcagtacaagacaacggtaacccacctaaatatg gatatttacgtgttcatatcaatattcaagatgtaaatgacaatccacctgtctttgcgcaaagtcagtttgtagcgagt atcaacgaaagtacacctgttggaaccacagtaatacacgtggaagctaacgataatgatataggcaataatggcaaagt tacatactcaatcatgggtgacgaaggacaatttcgtatcgatacaagcacgggcgaaattatcacaactacctctccat taatttgccatagtaggtgtgagcgatcaagtactatagcatgccaacctaacagttgtatcataacagttgtagcaagt gacagtggcattccaccattaagtggtagagcctatgtttcaatcaacgttaaagatgaaaacgatcacgcacctaaaat ggtaatcaattatcgcaatggtggtaccaatttttcaaccgtcaatgagaatgctgctgatggagagattgttgccatag taaccgttagtgacagtgactctggattatacggaaacatatcctcttttagtgttacatccggtaatgagctaaaccat ttccgtgtaagttcaaagctggaatacaaatacaacataattcaggtgaatggcgatcaagttcttgacagggagcgaaa acaaatgtacaacttcacacttaaagcagtagacaggggatcccctcctaaaagttctgtcgcacatttggttatttatg tgaacgatgtaaatgaccacaagcctgaatttcagacaaacatgtacactgcatctctgagtgagactgttccagaaggt acttttgtctctaatttgatcgcaactgatgctgactctggtttgaatgcagcgttaacatatgaaattgtctcaggaaa cgtcaacagttggtttcaaatcgacatatcttcaggcctcgttacaaccgcagcccttttggattacagcaaggcatcac gcacatctctaaatgtctcggtacatgatggtggtgcaacacctttctatgactacacaactcttataatagatgtatgg gatgaaaataacatggcccccacctttgctaaagcttatttcaatgtctccattggtgaaggacttccagcagattctaa gctatgggttgctagtgcagttgacaatgacagtggggtgaatggtaccatcacatatgcattctctagcaatgttgatg aaaaatatccaggaacattccgtttgaattcacagtcaggtgaaatcacaacaagaaaggcattggaccgtgaaactcag agcaaatacatgttggaaataatcgccagggatggtgctgcaagaccgttgtcatcaactgctacgttatatgttgaagt agaagataaaaatgacaatatcccatacttctatcctcaagaatactatgcaaatgtcgaccaggaatcacccattggta ccactgttcaagttgtcagtgcctttgatgctgaccttggagacaatggaannnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccaaagaac ttgatagggaaactcaggacctttacaaactgactgtcatggctagagacaagggagataatcctagaagctcatcagtt aatattactatccatatcactgatgcaaatgacaaccgtccattgttcctgaaaacatcctaccagtttgaagtctctga gaatcttgccgctggacaaaagattggctacataagggctctggatgcagacgttggcagaaactctgagctgtcctact atctggcacagaacagtgatagttttgctatagatgtacagacgggtgaaataaccactttgaaaagttttgaccgtgaa ctgctcctgaatgagactggtagggagtcgtaccagtttgaggcagttgtacatgataatggtattccagctcagcaaga taaagcaagcatcactgttactgttttggacaaaaatgacaatgcacccgagttcacaaaggtcatatataaagcatata cttcatattcattggttgtcatggcaacagatacaggaaaatctaacacctttagcgccacagcaattgtcaacatattt cttatggacgtcaatgacaatactcccagcttcgatcaaacatcatatagtgttagagttcctgaagatatggctgtagg ggaggaaataaacatcaaaatggttgccacggataccgacttgggtgtaaatgctgaaatttcatacgctctctccggaa caggaaatgatggtacttttaaaatagatagacatactggaaagctctatctggcgagaaagctgaactatgaacagaag agcgaatatcggatgaatgttgtcgcaactgataaaggattgcccgttttgtcttcaaatgctataattactattgatgt agacgatgtgaatgataaccatccagttttcgtaaaccttccaaatgtagtgaatatttccgaaaataattcacaattct ccagcgtcttacaaatatctgcctcggattcggattccggaagtaatggtcaggtgacgtattacgtagctgttgaggat ccaccagaaaacgcattttcaatccaaaatggcaatttactcgttcaaaaatcgttggatagagaaagtgtaccgttgta ccatctcaccattgcagctaccgatatagctttgccgatttcgtcaagaaaaacggtggaaaagactatcgccgtccgcg taatcgacacgaatgataatgctccggaatttatttctccaagggctattttgttgaattacccgacagttcaaggcaaa gtgggaaccatcatagcgcgagatccggatgattctaataatggaaaagttacatactcattattatcgcagaccgacaa attcaacatcggaagcggaagtggagaactttttcttacacaaaatctaccgcaatctccgtcacgtattactattcggg ttcgggcaacggacggcggatcaacgcctaagacaacggaagctgatttcgctatactccttcatcaaagcacgagaacg ggtccgacgttccaaaacctgccatacaccgcgcagatcacggaaaattccgcgaccggaagtagtgttttgcgaataac ggcgtcgacacaaagtgttgaatattacatcagtgggattaaatctggtgatagggatgtagcagagtgttttgtgatag agaagaattctgggatcattcagacaaagggtacgctggatagggaggaactgggtggagtccttactataacagtcagt gctgtggacgtggggaacaacgaacctgctgtcagcaccactcagttggtaggatgcanacgttatacatttcacaacga cgtttttatcgacagaaaataccccgcacaacaatga |
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Protein
| Protein ID | pfu_aug1.0_299.1_50774.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_299.1_50774.t1 MALSVNYYSIDTGLPLSVLNTPEIKLIGNLDREERDKYQLNISVQDNGNPPKYGYLRVHINIQDVNDNPPVFAQSQFVAS INESTPVGTTVIHVEANDNDIGNNGKVTYSIMGDEGQFRIDTSTGEIITTTSPLICHSRCERSSTIACQPNSCIITVVAS DSGIPPLSGRAYVSINVKDENDHAPKMVINYRNGGTNFSTVNENAADGEIVAIVTVSDSDSGLYGNISSFSVTSGNELNH FRVSSKLEYKYNIIQVNGDQVLDRERKQMYNFTLKAVDRGSPPKSSVAHLVIYVNDVNDHKPEFQTNMYTASLSETVPEG TFVSNLIATDADSGLNAALTYEIVSGNVNSWFQIDISSGLVTTAALLDYSKASRTSLNVSVHDGGATPFYDYTTLIIDVW DENNMAPTFAKAYFNVSIGEGLPADSKLWVASAVDNDSGVNGTITYAFSSNVDEKYPGTFRLNSQSGEITTRKALDRETQ SKYMLEIIARDGAARPLSSTATLYVEVEDKNDNIPYFYPQEYYANVDQESPIGTTVQVVSAFDADLGDNGXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKELDRETQDLYKLTVMARDKGDNPRSSSV NITIHITDANDNRPLFLKTSYQFEVSENLAAGQKIGYIRALDADVGRNSELSYYLAQNSDSFAIDVQTGEITTLKSFDRE LLLNETGRESYQFEAVVHDNGIPAQQDKASITVTVLDKNDNAPEFTKVIYKAYTSYSLVVMATDTGKSNTFSATAIVNIF LMDVNDNTPSFDQTSYSVRVPEDMAVGEEINIKMVATDTDLGVNAEISYALSGTGNDGTFKIDRHTGKLYLARKLNYEQK SEYRMNVVATDKGLPVLSSNAIITIDVDDVNDNHPVFVNLPNVVNISENNSQFSSVLQISASDSDSGSNGQVTYYVAVED PPENAFSIQNGNLLVQKSLDRESVPLYHLTIAATDIALPISSRKTVEKTIAVRVIDTNDNAPEFISPRAILLNYPTVQGK VGTIIARDPDDSNNGKVTYSLLSQTDKFNIGSGSGELFLTQNLPQSPSRITIRVRATDGGSTPKTTEADFAILLHQSTRT GPTFQNLPYTAQITENSATGSSVLRITASTQSVEYYISGIKSGDRDVAECFVIEKNSGIIQTKGTLDREELGGVLTITVS AVDVGNNEPAVSTTQLVGCXRYTFHNDVFIDRKYPAQQ |
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