Gene
| Gene Model ID | pfu_aug1.0_2991.1_01283 |
|---|---|
| Locus | scaffold2991.1 : 29746 ... 36554 : + |
| To GenomeBrowser | scaffold2991.1:29746..36554 |
| Genes list of scaffold | scaffold2991.1 |
| Synonym | NA |
Manual annotation
| Study field | other |
|---|---|
| Gene name | hypothetical protein |
| Description | Similar to ref|XP_003438917.1| PREDICTED: metabotropic glutamate receptor 7 [Oreochromis niloticus]Domain 7tm_3 and ANF_receptor |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2991.1_01283.t1 | 1 | 1 | ANF_receptor | 24 | 239 | 1.4e-30 | 106.3 | 4.7e-34 | 2.3e-30 | 105.5 |
| pfu_aug1.0_2991.1_01283.t1 | 1 | 1 | Peripla_BP_6 | 87 | 204 | 3.1e-06 | 26.7 | 1.2e-09 | 5.9e-06 | 25.8 |
| pfu_aug1.0_2991.1_01283.t1 | 1 | 1 | 7tm_3 | 361 | 598 | 1.5e-30 | 106.3 | 4.2e-34 | 2.1e-30 | 105.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2991.1_01283.t1 | gi|241848460|ref|XP_002415642.1| | pheromone and odorant receptor, putative [Ixodes scapularis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2991.1_01283.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2991.1_01283.t1 atgtttgacgtgcacatgaactccttggtgccattctcctgtggctctttgaaaacacagagtggattccagctgcttga ggcctttaactatgctattcaacaagtaaacgacaagtcagggcagtttgcaaacgttttacgcaatgtaaagctgggag gtgtagggctagatgcctgcatgagcacaatcagaagtgggtatttgatatcggacatccataatggactgattaccctg accaggaacggacaaaccgtcgatccagacgatatatcactatacattggtggatactccagtgatagctcactttacat ggcaaggatcttgagtgaactgaaagttccacagatcagctatgcatccagtagcgagtcactatctgaccagtttagat atccttatttcttgaggactgtacctgcagacgataaacaatcccttgctatgataagattcctgaacgctaaaaatatc cgttacgtccaagttgtgcagacaccagatgattatggtacaatgggagctgctaaattcaatgaattagcaagtaaaga agaaaacaaaatctgtgttgcacagaccattcgtttcccagacaatcaaacggtaaccagagaaagttccgacagagttg tacgcttgcttttgaacaaacctgtagcaaatactgtggtggtatttgctgatcagtccgatgttgtcgtcaactttaac gatgatagattctgggacactggatatgttattaacaactttaaccaggtcaacacctccaaggcgtacagacaagttgg atctcatgcaggatctacttttacatttggaaactatatgagtcaccgctcctctagttggtcaccatgccgacctgatc gtagctgtgattgttccacctcaccgattgtcctcgcacagacatcaaacgacacatacagaaggacgcagcctatagaa cctaggaactatctcttctacaacacaaggcaggagacagtcgagggacgtttacaggacgtttacgatcttgtctacaa atggccaatttgggctattgccaccgctgtgcccaccagtcttggaatccttgtcaccattatattgttctgttatttct tgatcgcctatcctgttagaggaggaacaactattttaggattcatgatgatgcttggcattctgggtatttatggcgtt aattttgccttcttcttaccggcaagtgaggccacatgcggagcaagagaattcgtccttggtaccgtttatgctatagt ttttgcagcacttctcgttaaggcagtagataattggagatttacggatctcgaggacagttttgtacgcaagtataaag gacttaccagtgcttgttcactctttatggttgcgttaggtatcgtttgtattcagctcatcattcctatagaatggctt atcctccgtcatccatcggccagcaagatggctaacgccacaaacattcacgattggatgtggtgcgaccctcatgattg gtacgacaaatctatggttctatccatggtgtttgtgatgttccttgttctacttaccgccatttttgctgcgttagcat gggatagtgatagtaattattacgagtcccgctggattcttgtatcgtcagtttgcacggctggctgcttcctcgtttgg atgatcgttacgacaaatgccgggccgccttatagggaccctgccatagcacttgccaacttcttcaatgccacggcgat acttgtgtttatgactttacgtaaatttgtgctgatgtacacaattacagatgaggaagatgagaagcagtcattcgctg accaagatagaggtaatgatttatattccacagtttattcgaatcagggatttgacgatgcggtgttccaaccagccccc tcaaaattagacgatactgcagataatgttgacggtgatgtagggttctaa |
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Protein
| Protein ID | pfu_aug1.0_2991.1_01283.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2991.1_01283.t1 MFDVHMNSLVPFSCGSLKTQSGFQLLEAFNYAIQQVNDKSGQFANVLRNVKLGGVGLDACMSTIRSGYLISDIHNGLITL TRNGQTVDPDDISLYIGGYSSDSSLYMARILSELKVPQISYASSSESLSDQFRYPYFLRTVPADDKQSLAMIRFLNAKNI RYVQVVQTPDDYGTMGAAKFNELASKEENKICVAQTIRFPDNQTVTRESSDRVVRLLLNKPVANTVVVFADQSDVVVNFN DDRFWDTGYVINNFNQVNTSKAYRQVGSHAGSTFTFGNYMSHRSSSWSPCRPDRSCDCSTSPIVLAQTSNDTYRRTQPIE PRNYLFYNTRQETVEGRLQDVYDLVYKWPIWAIATAVPTSLGILVTIILFCYFLIAYPVRGGTTILGFMMMLGILGIYGV NFAFFLPASEATCGAREFVLGTVYAIVFAALLVKAVDNWRFTDLEDSFVRKYKGLTSACSLFMVALGIVCIQLIIPIEWL ILRHPSASKMANATNIHDWMWCDPHDWYDKSMVLSMVFVMFLVLLTAIFAALAWDSDSNYYESRWILVSSVCTAGCFLVW MIVTTNAGPPYRDPAIALANFFNATAILVFMTLRKFVLMYTITDEEDEKQSFADQDRGNDLYSTVYSNQGFDDAVFQPAP SKLDDTADNVDGDVGF |
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