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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2991.1_01286
Locus scaffold2991.1 : 72441 ... 90780 : -
To GenomeBrowser scaffold2991.1:72441..90780
Genes list of scaffold scaffold2991.1
Synonym pfu_aug2.0_670.1_01032

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_2991.1_01286.t1 1 1 Exo_endo_phos 1 163 4.2e-15 56.3 9.2e-19 6.8e-15 55.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_2991.1_01286.t1 gi|224076326|ref|XP_002194163.1| 0.0

Transcript
Transcript IDpfu_aug1.0_2991.1_01286.t1
Definition-
>pfu_aug1.0_2991.1_01286.t1
ggtaacaagggtggtgtaagtgtgagatttgaagtgaatggcactaaagttatctttgtaaattgtcatttagcggctca
tcggaacaacgtaaaagaacgtctggaggattatgatacaattcttgccacacagttcttcaaagacaatgacactgata
atatcctggaccatgacatggtgttctggttgggagatttgaatttccgagtggatgatttctccagagaagaggttgaa
agccatataacaaagaagttgtacgaccctttacttgaaaaagatcagctattagactgcatgaagaaagaacttatact
agtaaactttaaggaggggcatatcaaatttcctccaacatataaatttgataaagcgtggtgtgaccgtattttgtgga
acgtggatgaggcaacttttgttaacgtggatatcactgtggaacagacttgttacacatcactgattgaatacaccgac
agtgaccacaaacctgtaataggaacgtttgatttacaggtatgtgcccatcctgtatcaccagcaatagttacgtttta
tcttccatgtaaactatacataaatcaggagaatgaaattcgatataaaatgaataaagacaaaaaacgttcttcctcat
catgggactggattggactatacaaggaggattttactcacttgagaaaatatgagagttatacatatgctaaagctaat
gcagaagataaaaaaaatggagtgaccttgaccttgtccaggagtatgatggccgtgttgccaggcaactactacctctg
ttatatcagccaatacaaagacacgcttcttggaatgagtcagcttatcacgtgcaaaaatgatccgataatccggaaat
ccgcgttccggatccggacggtagtttttggaaacggacgtgcggatcaaccgttattttgttccgttagtccggacgat
ataagtaactacggacgtgttttcataacaattaatttttacctggagaaatctacacggacgtgtttttataacaatta
a

Protein
Protein IDpfu_aug1.0_2991.1_01286.t1
Definition-
>pfu_aug1.0_2991.1_01286.t1
GNKGGVSVRFEVNGTKVIFVNCHLAAHRNNVKERLEDYDTILATQFFKDNDTDNILDHDMVFWLGDLNFRVDDFSREEVE
SHITKKLYDPLLEKDQLLDCMKKELILVNFKEGHIKFPPTYKFDKAWCDRILWNVDEATFVNVDITVEQTCYTSLIEYTD
SDHKPVIGTFDLQVCAHPVSPAIVTFYLPCKLYINQENEIRYKMNKDKKRSSSSWDWIGLYKEDFTHLRKYESYTYAKAN
AEDKKNGVTLTLSRSMMAVLPGNYYLCYISQYKDTLLGMSQLITCKNDPIIRKSAFRIRTVVFGNGRADQPLFCSVSPDD
ISNYGRVFITINFYLEKSTRTCFYNN

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