Gene
Gene Model ID | pfu_aug1.0_2993.1_30315 |
---|---|
Locus | scaffold2993.1 : 1 ... 16979 : + |
To GenomeBrowser | scaffold2993.1:1..16979 |
Genes list of scaffold | scaffold2993.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_2993.1_30315.t1 | 1 | 1 | DUF1032 | 24 | 116 | 4.1e-19 | 68.4 | 1.2e-22 | 4.6e-19 | 68.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_2993.1_30315.t1 | gi|270002412|gb|EEZ98859.1| | hypothetical protein TcasGA2_TC004469 [Tribolium castaneum] | 2.0e-13 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
egg-4cell | 1 |
8-16cell | 1 |
trochophore | 1 |
>Adult tissues | |
maleGonad | 1 |
pearlSac | 1 |
Transcript
Transcript ID | pfu_aug1.0_2993.1_30315.t1 |
---|---|
Definition | - |
>pfu_aug1.0_2993.1_30315.t1 tccatggatgcccataatgaagttgaggaagatgacgatgaaaatgaagaggagaacagaaatcgtcctggatagacacg agccgtttgacataaacagatacggatcacttgtattgggtacattacctaaaggaactctatcaaacttccagaaagtg gtcgtaaacaaacctacatacgaagtgtgcaggattttcttggctactctaatgctggccaacacaaggaatgttgatat caaatgtaaggaaggcaagtcaataagtatggacgactttcagttatctctgctgtcaacaaaacgacactttgaacaat tagaggagtatcaggctccctcaatagcaaccaaaacgtga |
Protein
Protein ID | pfu_aug1.0_2993.1_30315.t1 |
---|---|
Definition | - |
>pfu_aug1.0_2993.1_30315.t1 PWMPIMKLRKMTMKMKRRTEIVLDRHEPFDINRYGSLVLGTLPKGTLSNFQKVVVNKPTYEVCRIFLATLMLANTRNVDI KCKEGKSISMDDFQLSLLSTKRHFEQLEEYQAPSIATKT |