Gene
| Gene Model ID | pfu_aug1.0_2993.1_30316 |
|---|---|
| Locus | scaffold2993.1 : 19738 ... 24365 : - |
| To GenomeBrowser | scaffold2993.1:19738..24365 |
| Genes list of scaffold | scaffold2993.1 |
| Synonym | pfu_aug2.0_257.1_23750 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2993.1_30316.t1 | 3 | 1 | PP1c_bdg | 70 | 128 | 1.1e-12 | 47.8 | 0.033 | 490.0 | -0.4 |
| pfu_aug1.0_2993.1_30316.t1 | 3 | 2 | PP1c_bdg | 175 | 311 | 1.1e-12 | 47.8 | 1.0 | 15000.0 | -8.1 |
| pfu_aug1.0_2993.1_30316.t1 | 3 | 3 | PP1c_bdg | 253 | 525 | 1.1e-12 | 47.8 | 7.2e-17 | 1.1e-12 | 47.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 2 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2993.1_30316.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2993.1_30316.t1 atgcaagaacaaacatttaataaggaatgtcatatgaacattccaaacaaaccatttcccttcaacgcccagtgctttca gtttcatccctccataaaaagtactattactcataatccctcagtatcatataacaccactgccatggaaaatgcacaaa agaaattaaaatcaaacacatttggctgctttaagaattttcctgtttccaagaaaagaaatcgttataatcgatacaac tggcaattaccaccaaaagctgacaagtcgagagtaacagatacacctagtgatactaccagtaatgagaaaattcagca gtcatctgtgccaaaacaaaagcatactgtaagagtatgtgtcaaacttcaacaggaaaaatctgggtccttgggaaata aagttaaacttcaacaggcaaaatctgagcccttggaaagtaaaaagggtttggatgcacacattactactcaaatgggg catcttagcttgggtgaaaaagttgctttggaaaatgcaaagaacacagctttgaagaccagtcctgaatcagaaagtga aattgattggttcagtatgtctaggcaaaattcagagaaagaacttccatctctttcattgatgaattgcggagatgaag attcagatgataacatgtgcaatattagtgatgaagtcagggatttattcagctgttgtgattctcagagtaagccttgt gatgtggtagagaataggaatgatactgataaaaaagaacctgatatgaagacatcacaatcggagcaacaagttcagtt acctggcgatatctctgtgaagaacatggacagagtgacagaatcagcaggaagcagtcacaagaatgagacaattgatt cagtcgaatcagaaagaagtaaaatgtcaattcctatggtgctttatgtgagggacaataaaaaagcacgctcctccaag aaaaagaggagaaagcgtgaaaagaaatcaaatgtagaacagcatgcaaagaataacacaaattttgtgggcagtgacat tgataacaagaaacggaaatttgacattttctcagagacatatcattcctctagtgctggatctagtccaatgaatgttc actcttttttaattgctttcaatgatgaaggagcaaacagctcagatggtgagattgattggtctgatgatgatgacggt gatgatgatgaatgtgatgcagacttcttgtcagtttctagttttacatgtcctctaagtctaaatgtcatatgcgctgt tagtagaccagaaagtcccaaatcttccaacacagaacttgaagctgtgaattcagcgtggaaaataaatatccaactaa acgcaagccctaagaagcagtgcaagtctgacaaaaaggtccactttcctagtgatgacaacttgactgaagtacacacg gcaggagactggtgtcgcaagggccagtgggaggagtttgctcgggatagaatgagatttgctcaacgaattcaagactt ggaatccatcatttctccagtgctacaagcagatcatagacagaaaataagaaatcttctctccaaatag |
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Protein
| Protein ID | pfu_aug1.0_2993.1_30316.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2993.1_30316.t1 MQEQTFNKECHMNIPNKPFPFNAQCFQFHPSIKSTITHNPSVSYNTTAMENAQKKLKSNTFGCFKNFPVSKKRNRYNRYN WQLPPKADKSRVTDTPSDTTSNEKIQQSSVPKQKHTVRVCVKLQQEKSGSLGNKVKLQQAKSEPLESKKGLDAHITTQMG HLSLGEKVALENAKNTALKTSPESESEIDWFSMSRQNSEKELPSLSLMNCGDEDSDDNMCNISDEVRDLFSCCDSQSKPC DVVENRNDTDKKEPDMKTSQSEQQVQLPGDISVKNMDRVTESAGSSHKNETIDSVESERSKMSIPMVLYVRDNKKARSSK KKRRKREKKSNVEQHAKNNTNFVGSDIDNKKRKFDIFSETYHSSSAGSSPMNVHSFLIAFNDEGANSSDGEIDWSDDDDG DDDECDADFLSVSSFTCPLSLNVICAVSRPESPKSSNTELEAVNSAWKINIQLNASPKKQCKSDKKVHFPSDDNLTEVHT AGDWCRKGQWEEFARDRMRFAQRIQDLESIISPVLQADHRQKIRNLLSK |
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