Gene
| Gene Model ID | pfu_aug1.0_2993.1_30317 |
|---|---|
| Locus | scaffold2993.1 : 26346 ... 34056 : + |
| To GenomeBrowser | scaffold2993.1:26346..34056 |
| Genes list of scaffold | scaffold2993.1 |
| Synonym | NA |
Manual annotation
| Study field | Reproduction |
|---|---|
| Gene name | vitelline envelope zona pellucida |
| Description | Best hit to DQ453738 (abalone VEZP domain 8). 105 bits, 4e-21 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2993.1_30317.t1 | 1 | 1 | Zona_pellucida | 30 | 130 | 8.8e-06 | 25.3 | 6.2e-10 | 9.2e-06 | 25.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2993.1_30317.t1 | gi|91992376|gb|ABE72943.1| | vitelline envelope zona pellucida domain 8 [Haliotis corrugata] | 3.0e-21 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2993.1_30317.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2993.1_30317.t1 atgaaggttgccatggagagtcatggagggaacgtgacatctcccatagttttagaggtgatggatgtcctgaataatgt tataaaagaggtcatacctgttggaaagacgatcaaacttagagggcaaatcaaagatgccacaaatgtgactggtttga gaccaattaattgtgaagcttcaaataaggagagagattatccaattttgctggcaggatgtggagagggtttgattttt agtaagaacactggttttacaacagatggattggagatgaggagtccttactttaaggctttccgtttagagggtgggac ggagatgatttttcgctgtcattttgtggcttgccatgctgtaggaggctgtgatgggacttcctgtaaaaattga |
|
Protein
| Protein ID | pfu_aug1.0_2993.1_30317.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2993.1_30317.t1 MKVAMESHGGNVTSPIVLEVMDVLNNVIKEVIPVGKTIKLRGQIKDATNVTGLRPINCEASNKERDYPILLAGCGEGLIF SKNTGFTTDGLEMRSPYFKAFRLEGGTEMIFRCHFVACHAVGGCDGTSCKN |
|