Gene
Gene Model ID | pfu_aug1.0_2993.1_30317 |
---|---|
Locus | scaffold2993.1 : 26346 ... 34056 : + |
To GenomeBrowser | scaffold2993.1:26346..34056 |
Genes list of scaffold | scaffold2993.1 |
Synonym | NA |
Manual annotation
Study field | Reproduction |
---|---|
Gene name | vitelline envelope zona pellucida |
Description | Best hit to DQ453738 (abalone VEZP domain 8). 105 bits, 4e-21 |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_2993.1_30317.t1 | 1 | 1 | Zona_pellucida | 30 | 130 | 8.8e-06 | 25.3 | 6.2e-10 | 9.2e-06 | 25.2 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_2993.1_30317.t1 | gi|91992376|gb|ABE72943.1| | vitelline envelope zona pellucida domain 8 [Haliotis corrugata] | 3.0e-21 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
egg-4cell | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_2993.1_30317.t1 |
---|---|
Definition | - |
>pfu_aug1.0_2993.1_30317.t1 atgaaggttgccatggagagtcatggagggaacgtgacatctcccatagttttagaggtgatggatgtcctgaataatgt tataaaagaggtcatacctgttggaaagacgatcaaacttagagggcaaatcaaagatgccacaaatgtgactggtttga gaccaattaattgtgaagcttcaaataaggagagagattatccaattttgctggcaggatgtggagagggtttgattttt agtaagaacactggttttacaacagatggattggagatgaggagtccttactttaaggctttccgtttagagggtgggac ggagatgatttttcgctgtcattttgtggcttgccatgctgtaggaggctgtgatgggacttcctgtaaaaattga |
Protein
Protein ID | pfu_aug1.0_2993.1_30317.t1 |
---|---|
Definition | - |
>pfu_aug1.0_2993.1_30317.t1 MKVAMESHGGNVTSPIVLEVMDVLNNVIKEVIPVGKTIKLRGQIKDATNVTGLRPINCEASNKERDYPILLAGCGEGLIF SKNTGFTTDGLEMRSPYFKAFRLEGGTEMIFRCHFVACHAVGGCDGTSCKN |