Gene
| Gene Model ID | pfu_aug1.0_2993.1_30318 |
|---|---|
| Locus | scaffold2993.1 : 34086 ... 52525 : - |
| To GenomeBrowser | scaffold2993.1:34086..52525 |
| Genes list of scaffold | scaffold2993.1 |
| Synonym | pfu_aug2.0_660.1_01011 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2993.1_30318.t1 | 2 | 1 | Oxysterol_BP | 43 | 112 | 3.7e-09 | 35.5 | 2.7e-09 | 4.0e-05 | 22.2 |
| pfu_aug1.0_2993.1_30318.t1 | 2 | 2 | Oxysterol_BP | 111 | 140 | 3.7e-09 | 35.5 | 1.1e-06 | 0.016 | 13.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2993.1_30318.t1 | gi|345327939|ref|XP_001508751.2| | 1.0e-16 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2993.1_30318.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2993.1_30318.t1 atgactactggtccaatagaccatgacgatgaagttgaggatagtccaggggcgagggaggaggaactaggaggagtgga ggagcataaaagtgtcatcttacatttactctcacagctcaaactgggcatggacctcaccaaggtaaatactaacctat acatgtatagtgtgttaagacttaatttactgcagcatgatgaggagtatgtgtttggtttgccaagtgcctatgccagg tccatattgaccgtgccatgggccgagatgggagataagatctccgttacatgtgccaaaactaattattctgccaactg tacattccacaccaagcttgaagaaagacaaagagaaggggaaagacatagaaaggacactggtacatcatttcctacca agtacttcagaaaggatggagaaagttggatttttcataaggtgctagaaaaggggaacactaaaggaactgcgtaa |
|
Protein
| Protein ID | pfu_aug1.0_2993.1_30318.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2993.1_30318.t1 MTTGPIDHDDEVEDSPGAREEELGGVEEHKSVILHLLSQLKLGMDLTKVNTNLYMYSVLRLNLLQHDEEYVFGLPSAYAR SILTVPWAEMGDKISVTCAKTNYSANCTFHTKLEERQREGERHRKDTGTSFPTKYFRKDGESWIFHKVLEKGNTKGTA |
|