Gene
Gene Model ID | pfu_aug1.0_2993.1_30318 |
---|---|
Locus | scaffold2993.1 : 34086 ... 52525 : - |
To GenomeBrowser | scaffold2993.1:34086..52525 |
Genes list of scaffold | scaffold2993.1 |
Synonym | pfu_aug2.0_660.1_01011 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_2993.1_30318.t1 | 2 | 1 | Oxysterol_BP | 43 | 112 | 3.7e-09 | 35.5 | 2.7e-09 | 4.0e-05 | 22.2 |
pfu_aug1.0_2993.1_30318.t1 | 2 | 2 | Oxysterol_BP | 111 | 140 | 3.7e-09 | 35.5 | 1.1e-06 | 0.016 | 13.7 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_2993.1_30318.t1 | gi|345327939|ref|XP_001508751.2| | 1.0e-16 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_2993.1_30318.t1 |
---|---|
Definition | - |
>pfu_aug1.0_2993.1_30318.t1 atgactactggtccaatagaccatgacgatgaagttgaggatagtccaggggcgagggaggaggaactaggaggagtgga ggagcataaaagtgtcatcttacatttactctcacagctcaaactgggcatggacctcaccaaggtaaatactaacctat acatgtatagtgtgttaagacttaatttactgcagcatgatgaggagtatgtgtttggtttgccaagtgcctatgccagg tccatattgaccgtgccatgggccgagatgggagataagatctccgttacatgtgccaaaactaattattctgccaactg tacattccacaccaagcttgaagaaagacaaagagaaggggaaagacatagaaaggacactggtacatcatttcctacca agtacttcagaaaggatggagaaagttggatttttcataaggtgctagaaaaggggaacactaaaggaactgcgtaa |
Protein
Protein ID | pfu_aug1.0_2993.1_30318.t1 |
---|---|
Definition | - |
>pfu_aug1.0_2993.1_30318.t1 MTTGPIDHDDEVEDSPGAREEELGGVEEHKSVILHLLSQLKLGMDLTKVNTNLYMYSVLRLNLLQHDEEYVFGLPSAYAR SILTVPWAEMGDKISVTCAKTNYSANCTFHTKLEERQREGERHRKDTGTSFPTKYFRKDGESWIFHKVLEKGNTKGTA |