Gene
| Gene Model ID | pfu_aug1.0_29952.1_55324 |
|---|---|
| Locus | scaffold29952.1 : 3161 ... 10395 : - |
| To GenomeBrowser | scaffold29952.1:3161..10395 |
| Genes list of scaffold | scaffold29952.1 |
| Synonym | pfu_aug2.0_421.1_04141 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_29952.1_55324.t1 | 1 | 1 | TPMT | 35 | 202 | 4.5e-17 | 62.2 | 8.0e-21 | 5.9e-17 | 61.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_29952.1_55324.t1 | gi|348519393|ref|XP_003447215.1| | PREDICTED: probable thiopurine S-methyltransferase-like isoform X1 [Oreochromis niloticus] | 1.0e-20 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| >Adult tissues | |
| mantle | 1 |
| mantleEdge | 1 |
Transcript
| Transcript ID | pfu_aug1.0_29952.1_55324.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_29952.1_55324.t1 atgttttatcggcgcattattgttagatacaaaattaaaaatggatatttattcaatcttgataagaatgcatgttataa aggaaaagatgtacatgtattcggcaaagctttggagatgaaggaactcatgatgatgggacacgaggttgttgggatag aagtatcccctgtagcatgtaaggccttcttcgacgaaaatggtattaaatgtgaggcgaaacccatcgacaaaatacca ggaactgtctttgagggcagtaaaaatggcgtgaaagcgagactgtatagctgtgactattaccaattcagtcctgaaat cgaaggaggatttgaggcagtttgggatagcggaggactaaattcaatagaagaagacgacgacaagaaaaggtacatcg aggtgttaaagccgctgatggctccaggatgcgtcaatctgacagagctgtgtcagatatctgattgcccatataacatc tcggaggaggagctggggagtacctttggggacgaattcaacgtcaaacttttaactgacgtggaagcatggcaggaaat gaaagaaatggaagtcaaccgtctgaaactatatctcatagagagaaagttaaaatga |
|
Protein
| Protein ID | pfu_aug1.0_29952.1_55324.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_29952.1_55324.t1 MFYRRIIVRYKIKNGYLFNLDKNACYKGKDVHVFGKALEMKELMMMGHEVVGIEVSPVACKAFFDENGIKCEAKPIDKIP GTVFEGSKNGVKARLYSCDYYQFSPEIEGGFEAVWDSGGLNSIEEDDDKKRYIEVLKPLMAPGCVNLTELCQISDCPYNI SEEELGSTFGDEFNVKLLTDVEAWQEMKEMEVNRLKLYLIERKLK |
|