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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_29989.1_33740
Locus scaffold29989.1 : 1 ... 14434 : -
To GenomeBrowser scaffold29989.1:1..14434
Genes list of scaffold scaffold29989.1
Synonym pfu_aug2.0_221.1_03824

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_29989.1_33740.t1 gi|241997692|ref|XP_002433495.1| protein-tyrosine phosphotase, putative [Ixodes scapularis] 9.0e-27

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
8-16cell 1
egg-Dshape 1
trochophore 1
>Adult tissues
Dshape 2
adductorMuscle 2

Transcript
Transcript IDpfu_aug1.0_29989.1_33740.t1
Definition-
>pfu_aug1.0_29989.1_33740.t1
gaactaaagaaacgaggagctaaggatgtggtgagagtctgtgagccaacatataagacagagaagctgaatgacgaggg
aatccgagttttggattggcaatttgatgatggaaatccaccaccagttgaagtcatggatgaatggttcaatctgctaa
agacacgcttcaaagaagaacctggatgttgtgttgctgtacactgtgtggcgggtcttggaagaaaaatacggaaaatt
cggaaatcggcgatgtcggcgacaatcgagtttgattttcaacatcgattagtaacatcgctggccattcagcgaccgac
aatcgattgtcggcgataa

Protein
Protein IDpfu_aug1.0_29989.1_33740.t1
Definition-
>pfu_aug1.0_29989.1_33740.t1
ELKKRGAKDVVRVCEPTYKTEKLNDEGIRVLDWQFDDGNPPPVEVMDEWFNLLKTRFKEEPGCCVAVHCVAGLGRKIRKI
RKSAMSATIEFDFQHRLVTSLAIQRPTIDCRR

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