Gene
| Gene Model ID | pfu_aug1.0_3.1_00028 |
|---|---|
| Locus | scaffold3.1 : 15256 ... 23084 : + |
| To GenomeBrowser | scaffold3.1:15256..23084 |
| Genes list of scaffold | scaffold3.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3.1_00028.t1 | 5 | 1 | LRR_8 | 49 | 59 | 2.2e-30 | 104.1 | 0.59 | 1100.0 | -0.6 |
| pfu_aug1.0_3.1_00028.t1 | 6 | 1 | LRR_4 | 49 | 58 | 2.8e-14 | 52.3 | 0.18 | 330.0 | 1.0 |
| pfu_aug1.0_3.1_00028.t1 | 8 | 1 | LRR_1 | 49 | 58 | 1.6e-11 | 42.5 | 0.077 | 140.0 | 3.1 |
| pfu_aug1.0_3.1_00028.t1 | 7 | 1 | LRR_7 | 49 | 58 | 5.6e-07 | 28.7 | 0.72 | 1300.0 | 0.4 |
| pfu_aug1.0_3.1_00028.t1 | 5 | 2 | LRR_8 | 130 | 140 | 2.2e-30 | 104.1 | 0.28 | 520.0 | 0.5 |
| pfu_aug1.0_3.1_00028.t1 | 6 | 2 | LRR_4 | 130 | 141 | 2.8e-14 | 52.3 | 0.043 | 80.0 | 3.0 |
| pfu_aug1.0_3.1_00028.t1 | 8 | 2 | LRR_1 | 130 | 147 | 1.6e-11 | 42.5 | 0.058 | 110.0 | 3.4 |
| pfu_aug1.0_3.1_00028.t1 | 7 | 2 | LRR_7 | 130 | 141 | 5.6e-07 | 28.7 | 0.094 | 170.0 | 3.1 |
| pfu_aug1.0_3.1_00028.t1 | 5 | 3 | LRR_8 | 155 | 210 | 2.2e-30 | 104.1 | 2.6e-12 | 4.7e-09 | 35.8 |
| pfu_aug1.0_3.1_00028.t1 | 6 | 3 | LRR_4 | 155 | 190 | 2.8e-14 | 52.3 | 1.5e-05 | 0.028 | 14.0 |
| pfu_aug1.0_3.1_00028.t1 | 2 | 1 | LRR_5 | 162 | 253 | 1.8e-17 | 63.2 | 2.4e-12 | 4.4e-09 | 36.1 |
| pfu_aug1.0_3.1_00028.t1 | 8 | 3 | LRR_1 | 175 | 195 | 1.6e-11 | 42.5 | 0.0056 | 10.0 | 6.5 |
| pfu_aug1.0_3.1_00028.t1 | 5 | 4 | LRR_8 | 199 | 258 | 2.2e-30 | 104.1 | 2.2e-15 | 4.0e-12 | 45.6 |
| pfu_aug1.0_3.1_00028.t1 | 6 | 4 | LRR_4 | 199 | 235 | 2.8e-14 | 52.3 | 7.7e-07 | 0.0014 | 18.1 |
| pfu_aug1.0_3.1_00028.t1 | 8 | 4 | LRR_1 | 199 | 219 | 1.6e-11 | 42.5 | 0.00034 | 0.63 | 10.2 |
| pfu_aug1.0_3.1_00028.t1 | 7 | 3 | LRR_7 | 199 | 213 | 5.6e-07 | 28.7 | 0.055 | 100.0 | 3.8 |
| pfu_aug1.0_3.1_00028.t1 | 2 | 2 | LRR_5 | 212 | 316 | 1.8e-17 | 63.2 | 8.5e-14 | 1.6e-10 | 40.8 |
| pfu_aug1.0_3.1_00028.t1 | 6 | 5 | LRR_4 | 223 | 261 | 2.8e-14 | 52.3 | 1.6e-08 | 2.9e-05 | 23.5 |
| pfu_aug1.0_3.1_00028.t1 | 8 | 5 | LRR_1 | 223 | 245 | 1.6e-11 | 42.5 | 0.00043 | 0.79 | 9.9 |
| pfu_aug1.0_3.1_00028.t1 | 7 | 4 | LRR_7 | 223 | 236 | 5.6e-07 | 28.7 | 0.00084 | 1.6 | 9.2 |
| pfu_aug1.0_3.1_00028.t1 | 7 | 5 | LRR_7 | 246 | 260 | 5.6e-07 | 28.7 | 0.012 | 23.0 | 5.7 |
| pfu_aug1.0_3.1_00028.t1 | 5 | 5 | LRR_8 | 247 | 306 | 2.2e-30 | 104.1 | 4.9e-17 | 9.1e-14 | 50.9 |
| pfu_aug1.0_3.1_00028.t1 | 8 | 6 | LRR_1 | 247 | 269 | 1.6e-11 | 42.5 | 0.00066 | 1.2 | 9.4 |
| pfu_aug1.0_3.1_00028.t1 | 6 | 6 | LRR_4 | 271 | 307 | 2.8e-14 | 52.3 | 4.7e-08 | 8.7e-05 | 22.0 |
| pfu_aug1.0_3.1_00028.t1 | 8 | 7 | LRR_1 | 271 | 292 | 1.6e-11 | 42.5 | 0.00019 | 0.35 | 11.0 |
| pfu_aug1.0_3.1_00028.t1 | 7 | 6 | LRR_7 | 271 | 285 | 5.6e-07 | 28.7 | 0.00071 | 1.3 | 9.5 |
| pfu_aug1.0_3.1_00028.t1 | 8 | 8 | LRR_1 | 295 | 307 | 1.6e-11 | 42.5 | 0.0053 | 9.9 | 6.6 |
| pfu_aug1.0_3.1_00028.t1 | 7 | 7 | LRR_7 | 295 | 306 | 5.6e-07 | 28.7 | 0.17 | 310.0 | 2.3 |
Transcript
| Transcript ID | pfu_aug1.0_3.1_00028.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3.1_00028.t1 atgtatatgcaaagcctatatgtcttagagaagatcagctttgtgatggaataccacaatgtcctcactgggatgacgag aatgcttgtcctatcaaacattgtcctgacggttgccttagctgttcaaatcacatatatattgctggatgtgtcgtata ataacattgaatctgtagttttacgtgaggatccacaggctgtttatattctaaatggaaatcctttaaaacaaattaca tatagtaatgcatatgaaatctcactaagaggtactgggataaaaactcttaactggtacgtggatgaaaacactggttt aattaccatacatgtcgattcacctgaaataggaagccctgattggttttatttctattgttggatacgcaaactagatc tggccgataatgaaatcgaaactaccgagttcctttcggtttgcagctattttccgtttgttgtggatttgacaaacaac cttatcacaaacctgtcgaaaaaatcattacatggaatggaaagtattaaagaactacatttttcaggaaatctgttaat gtccatatcatctgacacattttcgggaaaacttcagctccgaaatttgaattttaggaataacaaaataagcacaattg aagacaggtcttttcaaacaaattggaatctcaaaaatcttgatttgggacaaaatagattgaccattattcatgaaacc tgctttcttaacctaacacaactagaagtgctatatcttgacaacaatgaaattgtcaatataaacataaattcgtttga agacttggaatccttgaaggtactggatatttcaaataacaaaataagacatcttttgcaaggtttatttcgtaatatga tgtccctggaaagtttaaacttaaagggaaataatttcgcgacttacgaagatatgttttatggcctagctatattatct gacctgaaagcagatatatttacggttatactatgtgatattcctccatatgaatctaataggggaagctcggaactaaa aatagaggttttggaattgtcttatgggcgatacggacgtagcagtgtaaagtatgaacaaaataatacagaaataacag atgcagagagcagtgtaaagtttgaaagagacgatacacaaataacacatgcaggaagcggtgtaaagtatgaaagagat gatacacaaatcaaacatgcaggacgcggtgtaaaggatgaaaaggacgatacacaaataacatatgcaaaacatgaaaa ggatgatacaagaataacagattcaggaagcagtgtattgtatgaaggaggtgatacacaaataacacatgcaggaagca gtgtaaaggatgaaaaggacgatacacaaataacacatgcaggaagcagtgtagagtataaaaaggacaatatacaaatg acaaatgcaagacgcggtgttaagtatgaaagagatgatacacaaataacacttgaaggacgcgacgtaaaggatgaaaa agatgataggcgataa |
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Protein
| Protein ID | pfu_aug1.0_3.1_00028.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3.1_00028.t1 MYMQSLYVLEKISFVMEYHNVLTGMTRMLVLSNIVLTVALAVQITYILLDVSYNNIESVVLREDPQAVYILNGNPLKQIT YSNAYEISLRGTGIKTLNWYVDENTGLITIHVDSPEIGSPDWFYFYCWIRKLDLADNEIETTEFLSVCSYFPFVVDLTNN LITNLSKKSLHGMESIKELHFSGNLLMSISSDTFSGKLQLRNLNFRNNKISTIEDRSFQTNWNLKNLDLGQNRLTIIHET CFLNLTQLEVLYLDNNEIVNININSFEDLESLKVLDISNNKIRHLLQGLFRNMMSLESLNLKGNNFATYEDMFYGLAILS DLKADIFTVILCDIPPYESNRGSSELKIEVLELSYGRYGRSSVKYEQNNTEITDAESSVKFERDDTQITHAGSGVKYERD DTQIKHAGRGVKDEKDDTQITYAKHEKDDTRITDSGSSVLYEGGDTQITHAGSSVKDEKDDTQITHAGSSVEYKKDNIQM TNARRGVKYERDDTQITLEGRDVKDEKDDRR |
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