Gene
Gene Model ID | pfu_aug1.0_3.1_00030 |
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Locus | scaffold3.1 : 32556 ... 53534 : + |
To GenomeBrowser | scaffold3.1:32556..53534 |
Genes list of scaffold | scaffold3.1 |
Synonym | pfu_aug2.0_2502.1_08893 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_3.1_00030.t1 | 1 | 1 | Ldl_recept_a | 64 | 99 | 5.2e-07 | 29.4 | 1.0e-10 | 1.5e-06 | 27.9 |
Transcript
Transcript ID | pfu_aug1.0_3.1_00030.t1 |
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Definition | - |
>pfu_aug1.0_3.1_00030.t1 atgcaatctttcatcatcgtgacctatcatcacaccgacgcgatatgtttacctacaaatatcgtgtccagtactgtgaa aatttgtagcgattacatcggttgctatgcgcatgatttgaaagctgcaacaagtgaacggcagttcaatattcaacttg ccaagtcgattagttttacgtgtttcggctcgtgtcgacaagatgaattcatgtgtagagatggtacctgtacatggatg gataatttctgtgaccataaagtggactgtgaggacggaagtgacgaagactattgctgtcgccagatgaatgctcgaat ggagtgtttacatagacatgacatatacggggaacaaaaattcgacggaaagattttagattacactattgacggaagaa agtgttccagaccctgcagtggccatacaaagctatttgatgacagagtagaatgtgattttgacgcatcattttgtggc tggaaaagtttctcaaatgcaacaatcaagcaatggatttccgaagatcagactggaatcattcatatctcggcagaagg cacaagtgaaacaatactttcaagtccgatttctgatgatacagatactattggatatacagtggaacttacgactaaaa gggccaacagttctttttggtcaatgggatacgtaggatattttcttggcaaaagactcaatgcactcctatattggcag aacgaagactgctcccattgcgccattgcaatttcatttatcggaaaggttgtacgagtaccggtgacttatcactcgac gaaatttccacgagctggtctggagttttttgtgatatttgtttttgacatgagctcgacatttactcgagatctctttg agaacagtacaacactctcggcgaacactcgcgagtttaagcaacatatctacgatttgtacacatcttctcgacaaacg aagacttcagcacgggaacatacgaagtatagtattagtttcggacgagtttaa |
Protein
Protein ID | pfu_aug1.0_3.1_00030.t1 |
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Definition | - |
>pfu_aug1.0_3.1_00030.t1 MQSFIIVTYHHTDAICLPTNIVSSTVKICSDYIGCYAHDLKAATSERQFNIQLAKSISFTCFGSCRQDEFMCRDGTCTWM DNFCDHKVDCEDGSDEDYCCRQMNARMECLHRHDIYGEQKFDGKILDYTIDGRKCSRPCSGHTKLFDDRVECDFDASFCG WKSFSNATIKQWISEDQTGIIHISAEGTSETILSSPISDDTDTIGYTVELTTKRANSSFWSMGYVGYFLGKRLNALLYWQ NEDCSHCAIAISFIGKVVRVPVTYHSTKFPRAGLEFFVIFVFDMSSTFTRDLFENSTTLSANTREFKQHIYDLYTSSRQT KTSAREHTKYSISFGRV |