Gene
| Gene Model ID | pfu_aug1.0_3.1_00032 |
|---|---|
| Locus | scaffold3.1 : 58186 ... 81198 : + |
| To GenomeBrowser | scaffold3.1:58186..81198 |
| Genes list of scaffold | scaffold3.1 |
| Synonym | pfu_aug2.0_2431.1_05527 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3.1_00032.t1 | 8 | 1 | LRR_1 | 107 | 116 | 3.5e-09 | 35.4 | 0.81 | 1500.0 | 0.0 |
| pfu_aug1.0_3.1_00032.t1 | 5 | 1 | LRR_4 | 188 | 198 | 9.6e-11 | 41.0 | 0.27 | 500.0 | 0.4 |
| pfu_aug1.0_3.1_00032.t1 | 8 | 2 | LRR_1 | 188 | 207 | 3.5e-09 | 35.4 | 0.23 | 420.0 | 1.6 |
| pfu_aug1.0_3.1_00032.t1 | 5 | 1 | LRR_7 | 188 | 199 | 7.3e-06 | 25.3 | 0.16 | 300.0 | 2.3 |
| pfu_aug1.0_3.1_00032.t1 | 5 | 2 | LRR_4 | 212 | 247 | 9.6e-11 | 41.0 | 0.023 | 43.0 | 3.8 |
| pfu_aug1.0_3.1_00032.t1 | 3 | 1 | LRR_8 | 213 | 268 | 1.8e-30 | 104.4 | 2.2e-10 | 4.1e-07 | 29.6 |
| pfu_aug1.0_3.1_00032.t1 | 2 | 1 | LRR_5 | 215 | 309 | 7.5e-19 | 67.7 | 9.4e-11 | 1.7e-07 | 30.9 |
| pfu_aug1.0_3.1_00032.t1 | 8 | 3 | LRR_1 | 233 | 253 | 3.5e-09 | 35.4 | 0.027 | 50.0 | 4.5 |
| pfu_aug1.0_3.1_00032.t1 | 2 | 2 | LRR_5 | 246 | 373 | 7.5e-19 | 67.7 | 5.1e-17 | 9.4e-14 | 51.2 |
| pfu_aug1.0_3.1_00032.t1 | 3 | 2 | LRR_8 | 257 | 316 | 1.8e-30 | 104.4 | 5.6e-16 | 1.0e-12 | 47.5 |
| pfu_aug1.0_3.1_00032.t1 | 5 | 3 | LRR_4 | 257 | 292 | 9.6e-11 | 41.0 | 2.0e-07 | 0.00037 | 20.0 |
| pfu_aug1.0_3.1_00032.t1 | 8 | 4 | LRR_1 | 257 | 277 | 3.5e-09 | 35.4 | 0.017 | 31.0 | 5.1 |
| pfu_aug1.0_3.1_00032.t1 | 5 | 4 | LRR_4 | 281 | 320 | 9.6e-11 | 41.0 | 3.4e-09 | 6.4e-06 | 25.6 |
| pfu_aug1.0_3.1_00032.t1 | 8 | 5 | LRR_1 | 281 | 303 | 3.5e-09 | 35.4 | 5.1e-05 | 0.095 | 12.7 |
| pfu_aug1.0_3.1_00032.t1 | 5 | 2 | LRR_7 | 281 | 292 | 7.3e-06 | 25.3 | 0.0038 | 7.0 | 7.3 |
| pfu_aug1.0_3.1_00032.t1 | 5 | 3 | LRR_7 | 304 | 319 | 7.3e-06 | 25.3 | 0.0098 | 18.0 | 6.0 |
| pfu_aug1.0_3.1_00032.t1 | 3 | 3 | LRR_8 | 305 | 364 | 1.8e-30 | 104.4 | 5.3e-19 | 9.8e-16 | 57.2 |
| pfu_aug1.0_3.1_00032.t1 | 8 | 6 | LRR_1 | 305 | 326 | 3.5e-09 | 35.4 | 0.0013 | 2.3 | 8.5 |
| pfu_aug1.0_3.1_00032.t1 | 5 | 5 | LRR_4 | 329 | 364 | 9.6e-11 | 41.0 | 1.3e-07 | 0.00024 | 20.6 |
| pfu_aug1.0_3.1_00032.t1 | 8 | 7 | LRR_1 | 329 | 350 | 3.5e-09 | 35.4 | 0.00027 | 0.51 | 10.5 |
| pfu_aug1.0_3.1_00032.t1 | 5 | 4 | LRR_7 | 329 | 343 | 7.3e-06 | 25.3 | 0.0023 | 4.2 | 8.0 |
| pfu_aug1.0_3.1_00032.t1 | 8 | 8 | LRR_1 | 353 | 366 | 3.5e-09 | 35.4 | 0.005 | 9.3 | 6.7 |
| pfu_aug1.0_3.1_00032.t1 | 5 | 5 | LRR_7 | 353 | 365 | 7.3e-06 | 25.3 | 0.21 | 380.0 | 2.0 |
Transcript
| Transcript ID | pfu_aug1.0_3.1_00032.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3.1_00032.t1 atgacgagttgtgtgaatgattggcgctatcgggattttgtaaccacaattgtacgttcttcgagacctctgggtaatcg gaaaagtgggagggttgtgcgcagaaaccaaagattgaatgaattcagcttcgtacgagtaaagaaaaatgtcggcaagg agtggggcacaattggtcccaattggaattccgacaatttgctggaagacctttcctccaaacaccacaaaatgttgtca atcagaaagtttaacatccgaataatatctgtttcaatgtacttattttcagaatcggacttttcttttacaaaattgtt agatgtgtcgtataatgacattgagtctggcgttttacgtgaggatccacaggctgtttatattctaaatggaaatcctt taaaacaaattatatatagtaatacatatgaaatctcactaagagatactgggataaaaactctaaactggtacgtggat gaaaaaaccaaatacattactatccatgtcaattcaccagatataggcagccctgattggggttatttctattgctggat acgcaaattagatgtggccaataatgaaatcgaaactaccgagttcctttcactttgcagcactttcctgtttgttgtgg atttttcaaacaacctaatcgcaaacctgtcgaaaaaatcgttacatggattggaaaatatcaaagaaatgcatttttca ggaaatttgttaacgttcatatcatctgatacgttttcgggaaaacttcagctccgaaatttgagttttagaaaaaacaa cataagcacaataggaaacaggccttttcgaacaaattggaatctcagatatcttgatttgggacacaatcgattgatca ttattcatgaaaactgcttttataacctaactcgactagaaaaattatatctagacaacaatgaaattgaaaatataaac acagacacgtttgaagtcttggaatctctgaaggtgctggacatttcaaataacaaaattagacatattttgcgaggcct gtttcgtaatatgatgtccctggaaagtttaaacttaaagggaaataatttcgtgacttacgaagatatgttttatggcc tagctatattatctgagttgaaagcagatatatttacagtatgctgtgcccgaccccagagcgttcttattgataactgc cacgccccaagcctgccgatatcctcttgcaaatatctattcaggactaattttctgtcaccgtttatctggcttttgac tgttgtaataattttaggtaccattctgatatatcacaaacactatatggagagctctagtctttattcaagcgtaaaca gacattttcttcttaatatatctatagttgacttcattttcggattaagtttgttcgccattgcaactaaagacgttcaa agtagaggaatatatggctttgaacatgttcaatggagtaaaagcttggcgtgtgacaccgttcgatttctttcactgac ctgtataattacatccaacctactctctgtatatgctacgtacactaaattggctataaccatgacgaaacggccagttt cgaggcgtaagtctttgtttcactgcctcacgatatggacaggaagtgtttctcttgccgtcatgtgttttatgatagat aaattcgtcgtcaacagctcttcagcttttcatcatatttgctggatgatacctttacatgaaacagagattgcgaatct ttctgatgacacatggaacatggtttttactgccttccatgcctcttgtctggtggtagtattgctgttggcatcgctaa tgctgataatgcagaagacagctgatcgacctgtatcatccagcgatatcgtctctcgtattatatttggtttaggcatt cggaatgcgttgatttgtattaaagacatacaggtagacttcaccgacgtccatggatggaaatatcgatctcaagatat aaagattgtcagacatgttatactatgtgatatccctccatatgaatctaataggggaagctcggaactaaaaatagagg ttttggaattgtcttatgggcgatacggacgtagcagtgtaaagtatgaacaaaataatacagaaataacagatgcagag agcagtgtaaagtttgaaagagacgatacacaaataacacatgcaggaagcggtgtaaaggatgaaaaggacgatacaca aataacacatgcagaaagcggtttgaagttcgaaaaagatgatacacaaatatcacatgcagaaataagcgcaaagtatg aaaaggacgatacacaaatatcacctgcaggaagcagtataacgtatgaaaaggacgatatacaaataacaaatgcagaa attggtttgaagttcgaaaaagatgatagtattacacaaatatcacatttagaaagcagtgttaagtatgaaaaggacga taaacaaatatcacatgcaggaagcagtgtaaagtatgaaaaggacgataaacaaatatcacatgcaggaagcagtgtaa agtatgaaaaggacgatacacaaatgccacatgcagaaagcagtgtaaggtatgaaaaagatgatacacaaataacacat gcaggaagcagtgtaaagtatgaacatgttgatacacaaataacatctggagagaaaagtgaaatgtttgaagaaagtga tgcaaaaataacatatatacgtggaaattgtggttcaaagtatgaaggagataatacagaaatcacacatgaagagaaca agagtatagagtacatgtacaagcaagatgatacaaagtaa |
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Protein
| Protein ID | pfu_aug1.0_3.1_00032.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3.1_00032.t1 MTSCVNDWRYRDFVTTIVRSSRPLGNRKSGRVVRRNQRLNEFSFVRVKKNVGKEWGTIGPNWNSDNLLEDLSSKHHKMLS IRKFNIRIISVSMYLFSESDFSFTKLLDVSYNDIESGVLREDPQAVYILNGNPLKQIIYSNTYEISLRDTGIKTLNWYVD EKTKYITIHVNSPDIGSPDWGYFYCWIRKLDVANNEIETTEFLSLCSTFLFVVDFSNNLIANLSKKSLHGLENIKEMHFS GNLLTFISSDTFSGKLQLRNLSFRKNNISTIGNRPFRTNWNLRYLDLGHNRLIIIHENCFYNLTRLEKLYLDNNEIENIN TDTFEVLESLKVLDISNNKIRHILRGLFRNMMSLESLNLKGNNFVTYEDMFYGLAILSELKADIFTVCCARPQSVLIDNC HAPSLPISSCKYLFRTNFLSPFIWLLTVVIILGTILIYHKHYMESSSLYSSVNRHFLLNISIVDFIFGLSLFAIATKDVQ SRGIYGFEHVQWSKSLACDTVRFLSLTCIITSNLLSVYATYTKLAITMTKRPVSRRKSLFHCLTIWTGSVSLAVMCFMID KFVVNSSSAFHHICWMIPLHETEIANLSDDTWNMVFTAFHASCLVVVLLLASLMLIMQKTADRPVSSSDIVSRIIFGLGI RNALICIKDIQVDFTDVHGWKYRSQDIKIVRHVILCDIPPYESNRGSSELKIEVLELSYGRYGRSSVKYEQNNTEITDAE SSVKFERDDTQITHAGSGVKDEKDDTQITHAESGLKFEKDDTQISHAEISAKYEKDDTQISPAGSSITYEKDDIQITNAE IGLKFEKDDSITQISHLESSVKYEKDDKQISHAGSSVKYEKDDKQISHAGSSVKYEKDDTQMPHAESSVRYEKDDTQITH AGSSVKYEHVDTQITSGEKSEMFEESDAKITYIRGNCGSKYEGDNTEITHEENKSIEYMYKQDDTK |
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