Gene
| Gene Model ID | pfu_aug1.0_3.1_00033 |
|---|---|
| Locus | scaffold3.1 : 85467 ... 97055 : - |
| To GenomeBrowser | scaffold3.1:85467..97055 |
| Genes list of scaffold | scaffold3.1 |
| Synonym | pfu_aug2.0_2431.1_05528 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3.1_00033.t1 | 2 | 1 | AAA | 1 | 25 | 4.5e-20 | 72.2 | 4.7e-05 | 0.029 | 14.5 |
| pfu_aug1.0_3.1_00033.t1 | 2 | 2 | AAA | 168 | 285 | 4.5e-20 | 72.2 | 1.8e-17 | 1.1e-14 | 54.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3.1_00033.t1 | gi|260807435|ref|XP_002598514.1| | hypothetical protein BRAFLDRAFT_118310 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_3.1_00033.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3.1_00033.t1 atgaccaacagaaaagacatgatagacgaggctttactcagacctggtagactggaggtacagatggagattggattgcc agatgagcatgggcgtgtccagattctcaatatacacacaaacgtaatgagagaaaacggcaaactggcacctgatgtaa atctgcaagaactagcgactctctcgaaaaacttcagtggagcagaaatagaggggctcgtacgatctgcacaatcaacg gctatgaaccgattgatcaaagcagcctctaaagttgaggtggatccagatgccatagagaaacttttgattacacggaa ggatttcttacatgcattagaacatgactgcaagccggcatttggaagtagcaaagaagaatttgagaagtatattgcta atggtataataaactggggtgaccctgtacaaagagtactggaagatggtgacttgcttatatcacagaccaagagtagt ggtacaactccattggtgactgttttattggaaggaccccctggtagtggaaaaacatcactagcggcacaaatcgccaa aaattctgattttccattcatcaaaatctgtacaccagagaatatgataggcttcacagagccagccaagtgtcaggcca ttaaaaagatttttgacgatgcatacaagtcaccactaagctgtgttattgtggatgatatagagagattactagattat gttcccattggaccaaggttctccaatcttgttttacaagctttgcttgttctattaaagaaaccccctccaccgggtag gaaacttttggttatcggtacaacaagcagaaaggacgttttacaagagatggatatggcggccatttttagtacaatcg tacatgtgtccagcatatctcttagtgaacatttaatgtcagttcttgaaaatgtggaagcttttggcaaaaatgaacta gacacccttcgaaagaaaactaatggaaagagattgtggataggaattaaaaagctgcttgttctgatagaaatgtcccg acagattgacgactctcatcgcattcccaaattcctgagtatattagaggaagaaggcgggctagaaatgacatag |
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Protein
| Protein ID | pfu_aug1.0_3.1_00033.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3.1_00033.t1 MTNRKDMIDEALLRPGRLEVQMEIGLPDEHGRVQILNIHTNVMRENGKLAPDVNLQELATLSKNFSGAEIEGLVRSAQST AMNRLIKAASKVEVDPDAIEKLLITRKDFLHALEHDCKPAFGSSKEEFEKYIANGIINWGDPVQRVLEDGDLLISQTKSS GTTPLVTVLLEGPPGSGKTSLAAQIAKNSDFPFIKICTPENMIGFTEPAKCQAIKKIFDDAYKSPLSCVIVDDIERLLDY VPIGPRFSNLVLQALLVLLKKPPPPGRKLLVIGTTSRKDVLQEMDMAAIFSTIVHVSSISLSEHLMSVLENVEAFGKNEL DTLRKKTNGKRLWIGIKKLLVLIEMSRQIDDSHRIPKFLSILEEEGGLEMT |
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