Gene
| Gene Model ID | pfu_aug1.0_3.1_00034 |
|---|---|
| Locus | scaffold3.1 : 97137 ... 113695 : - |
| To GenomeBrowser | scaffold3.1:97137..113695 |
| Genes list of scaffold | scaffold3.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3.1_00034.t1 | 1 | 1 | CDC48_N | 3 | 83 | 7.7e-12 | 44.9 | 7.3e-14 | 4.5e-11 | 42.5 |
| pfu_aug1.0_3.1_00034.t1 | 2 | 1 | CDC48_2 | 112 | 164 | 2.6e-13 | 49.4 | 1.9e-14 | 1.2e-11 | 44.0 |
| pfu_aug1.0_3.1_00034.t1 | 2 | 2 | CDC48_2 | 221 | 238 | 2.6e-13 | 49.4 | 0.11 | 70.0 | 3.1 |
| pfu_aug1.0_3.1_00034.t1 | 1 | 1 | AAA | 254 | 311 | 2.4e-15 | 56.9 | 1.4e-17 | 8.9e-15 | 55.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3.1_00034.t1 | gi|291232004|ref|XP_002735950.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_3.1_00034.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3.1_00034.t1 atggtattgaaggccggaaaatgtcccacggacgagttgtctctcacaaattgtgtgatactcaacgagccagaattcaa cgagaaagactgccctcatgtggaggtacagaccacaccccatcagaagttcgtcttttctgtcaagacatttccacgta ctccaattggaactgcaggcttcaacttgatgcagagaaaatgggcagttatatctacgaaccaggagattgaggtacga ccttacaagtttaatagtcgcacagactgtataggaaccataacagtggaggtggactttttacagaagaagaatgctaa ttctgatccacacgataccgacagaatggctgctgaattcttgatgcagtttaacaacagagcttttacagagggacaaa tcatggcgttccagtttgcagataagaaattgttaggactcaccgttaaggaaattgaagtgattgacttctccagtatg aaaggtgatactggaaaaacccaaagatcaaagttaggtttgttgactccaaattcaacagtgatttttgaaaaagctga aaattcaaccatcaacctaacaggaaaatcaaaaagcaaacaagcatacacgtctataataaatccagactgggatttta acaagatgggcataggtggtttggacaaagaattctccgctatcttcagacgagcatttgcttcaagagtatttccccct gacattgtagaacaaataggaatgaagcatgtcaaaggcattctgttatttgggcctcctggaacaggaaaaacactcat ggccaggcaaattggtaaaatgttaaatgctcgagagccaaagatagtgaatgggccacagattctggataaatatgttg gcgagtcagaagccaatatacgtaaattgtttgctgaggcagaagaggaggagaaaagggtgaaatgtgacgttagcaac gtcaaagcccagtatgttttcgtttttcagtcgtaa |
|
Protein
| Protein ID | pfu_aug1.0_3.1_00034.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3.1_00034.t1 MVLKAGKCPTDELSLTNCVILNEPEFNEKDCPHVEVQTTPHQKFVFSVKTFPRTPIGTAGFNLMQRKWAVISTNQEIEVR PYKFNSRTDCIGTITVEVDFLQKKNANSDPHDTDRMAAEFLMQFNNRAFTEGQIMAFQFADKKLLGLTVKEIEVIDFSSM KGDTGKTQRSKLGLLTPNSTVIFEKAENSTINLTGKSKSKQAYTSIINPDWDFNKMGIGGLDKEFSAIFRRAFASRVFPP DIVEQIGMKHVKGILLFGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRKLFAEAEEEEKRVKCDVSN VKAQYVFVFQS |
|