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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_3.1_00035
Locus scaffold3.1 : 136890 ... 147015 : -
To GenomeBrowser scaffold3.1:136890..147015
Genes list of scaffold scaffold3.1
Synonym pfu_aug2.0_863.1_11259

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_3.1_00035.t1 1 1 Innexin 30 399 0.0 358.5 0.0 0.0 358.3

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 3
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_3.1_00035.t1
Definition-
>pfu_aug1.0_3.1_00035.t1
atgctggggttcaaaatcattgatagctcattggaccacatcctcggtccagtgggtgtgtacgagggactccgaacggt
atacgatgataacttcatagatcgccttagccattactataccataattcttctgctgtttatgcaaattacggtggtca
cgtgtgaattcgtcggcgatccgatacaatgttggtgcccggcggagtttaccgaaaacgaagtttcctacacgaactac
gtttgctgggtgtccaatacatactatataccattctcacgaccaataccgaaaaattacgaaattcgccgaactgacga
aataacatattaccagtgggttccgttaattttgcttttgatggcgtttttattcaaactaccaagatctctgtggaaag
ctctagcgtatacaagttccggtgttggcttgaagagattgctggataattcgaagataacacagatcgattcttcagag
gatcgagagaagaagttgaaggcaatcgcgggtttcatcgatcaatggttgtctaatgtgcaacactcaagagcaggaat
gtgtccggggttacgagagagactttatcaaaagtgcaatatagggattggacgtcactacgggaactacttagtctttc
tttgcgtctttgtcaagctcttattcttcctaaacgccattgggcagttatatttcctcaacgaatttctcggcggcgac
gatttctatatttacggatatgaagtcatcgaatcgattttgacgaaaaatgattggtcgagaactcgtcgatttccgcg
cgtgacaatttgcgactttgatcttcggcagttgcaaaatgttcagaggtggtcggtgcagtgtattttaccaataaacc
tttataatgagaagttcttcattttcctttggttttggatcaccattgttgcaattttaagtttattcaacctcatgtat
tcaatattactcatcatgtgcaaacagcctagaaaaagtttcgcaatgaagtatctcaaagtgaacaacatttacgatac
aaaagataaagacatgtttatggcaaaactgaccaatcgtttcatttctaactatttgcgacaagatggtattttccttt
tgaaaataatgtcatccaatacaaatacagtaatggtaagcgatatcgtccgccatctttgggatatatttagaaaacgt
caatttcaccttgagagcaacggaagtttgcatactgttcaccgccagggggagccagctacggaccggaactctagatt
acgtccacctagtggcagaattgtccatcttaaggatgatatagaggatattgacgaagaagtggttccattacgacacg
tgccagctgaaagttacgtgtaa

Protein
Protein IDpfu_aug1.0_3.1_00035.t1
Definition-
>pfu_aug1.0_3.1_00035.t1
MLGFKIIDSSLDHILGPVGVYEGLRTVYDDNFIDRLSHYYTIILLLFMQITVVTCEFVGDPIQCWCPAEFTENEVSYTNY
VCWVSNTYYIPFSRPIPKNYEIRRTDEITYYQWVPLILLLMAFLFKLPRSLWKALAYTSSGVGLKRLLDNSKITQIDSSE
DREKKLKAIAGFIDQWLSNVQHSRAGMCPGLRERLYQKCNIGIGRHYGNYLVFLCVFVKLLFFLNAIGQLYFLNEFLGGD
DFYIYGYEVIESILTKNDWSRTRRFPRVTICDFDLRQLQNVQRWSVQCILPINLYNEKFFIFLWFWITIVAILSLFNLMY
SILLIMCKQPRKSFAMKYLKVNNIYDTKDKDMFMAKLTNRFISNYLRQDGIFLLKIMSSNTNTVMVSDIVRHLWDIFRKR
QFHLESNGSLHTVHRQGEPATDRNSRLRPPSGRIVHLKDDIEDIDEEVVPLRHVPAESYV

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