Gene
| Gene Model ID | pfu_aug1.0_3.1_00041 |
|---|---|
| Locus | scaffold3.1 : 233596 ... 236568 : + |
| To GenomeBrowser | scaffold3.1:233596..236568 |
| Genes list of scaffold | scaffold3.1 |
| Synonym | pfu_aug2.0_863.1_11253 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | tyrosinase-like protein 17 |
| Description | NCBI BLASTP hit to ACF25906.1 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3.1_00041.t1 | 2 | 1 | Tyrosinase | 68 | 121 | 3.2e-17 | 63.4 | 7.9e-21 | 5.8e-17 | 62.5 |
| pfu_aug1.0_3.1_00041.t1 | 2 | 2 | Tyrosinase | 168 | 190 | 3.2e-17 | 63.4 | 0.77 | 5700.0 | -2.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3.1_00041.t1 | gi|193878323|gb|ACF25906.1| | tyrosinase [Azumapecten farreri] | 4.0e-28 |
Transcript
| Transcript ID | pfu_aug1.0_3.1_00041.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3.1_00041.t1 atggaggacgctacaatctcgattctttggacaccaagctttttcgggaatgcttttaacgaagtagagcgaggtccatt tggtcactggacgacgcccgatggtcaaagactgcgaagaaacataggtttcctgggttcacttatacgtagatcggata tagaagggatgatagtaaatgcaagaaaccattcggacgtcgtgcgatccggatttgattctgtcacattttctgagtcg actatagaagctgaacatgataatgtccatgcatgggtaggagggacaatgagtggtttattaactgcagcatttgaccc attattctttcttcaccattgtttcatagatttaatttgggaaaaattgcgtgagggtttgcgccaaaagaacgtggatc cggaatccgactatcctgacacgataggtgaccaagcggcgggtagtcctatgtacttatttgactttcttagaaatatt gacggctattctgatagatggactaggcaattttaccaatacgacaatcagccaagttgttctggaggaacccaaggatg ttcgtcagaatatttaagatgtgccccaactagatctcagccagaaaatgttatgtgtacttccttgacctctaactacg tgctggatgtttcaccaagagtccgctacaaatctgcaatccttgatatcgagactacggttggtccaagattcacgagt tccacaaataagcatgttgctggtctttttaaacttatttcacctacttcacctctttcaagatctgagatcagtaaact ggcattttcgattctgaaaacgccgaatatatttaattccatatctgaaaaaatgaaacaacaactcatcatacgaatgt tttcgatgggtctataa |
|
Protein
| Protein ID | pfu_aug1.0_3.1_00041.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3.1_00041.t1 MEDATISILWTPSFFGNAFNEVERGPFGHWTTPDGQRLRRNIGFLGSLIRRSDIEGMIVNARNHSDVVRSGFDSVTFSES TIEAEHDNVHAWVGGTMSGLLTAAFDPLFFLHHCFIDLIWEKLREGLRQKNVDPESDYPDTIGDQAAGSPMYLFDFLRNI DGYSDRWTRQFYQYDNQPSCSGGTQGCSSEYLRCAPTRSQPENVMCTSLTSNYVLDVSPRVRYKSAILDIETTVGPRFTS STNKHVAGLFKLISPTSPLSRSEISKLAFSILKTPNIFNSISEKMKQQLIIRMFSMGL |
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