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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_3.1_00044
Locus scaffold3.1 : 273725 ... 279845 : -
To GenomeBrowser scaffold3.1:273725..279845
Genes list of scaffold scaffold3.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_3.1_00044.t1 1 1 SNF 1 114 2.9e-34 118.4 2.2e-38 3.2e-34 118.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_3.1_00044.t1 gi|223648942|gb|ACN11229.1| Sodium- and chloride-dependent taurine transporter [Salmo salar] 9.0e-39

Transcript
Transcript IDpfu_aug1.0_3.1_00044.t1
Definition-
>pfu_aug1.0_3.1_00044.t1
atgtacgtattccagttgtttgattactatgcagctagcggaatggtcttactgtggatatctttctgggaagctatagt
tataggatggatctttggagcagacagattttatgatgccattgagatgatgataggatatagaccaaatatttggctga
agatatgttggaaatatctaacaccactcatcaccttgggtatatttgtattccatatagtagagttcagtccaccgaag
tataatctatcctacgagtatcccggatgggcacaaggtttaggaatagttctggctttatcatccatggtttgtgttcc
ggtaatagtagtaaaagttttcttgacttccgacggcagtccaaatgagagacttcgtgctgccatctgtccgcggcttc
agaaatatcaagttcacgatagatggcgctccaaaagtaaacttggcgattataaataccaatggataactgtgtga

Protein
Protein IDpfu_aug1.0_3.1_00044.t1
Definition-
>pfu_aug1.0_3.1_00044.t1
MYVFQLFDYYAASGMVLLWISFWEAIVIGWIFGADRFYDAIEMMIGYRPNIWLKICWKYLTPLITLGIFVFHIVEFSPPK
YNLSYEYPGWAQGLGIVLALSSMVCVPVIVVKVFLTSDGSPNERLRAAICPRLQKYQVHDRWRSKSKLGDYKYQWITV

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