Gene
| Gene Model ID | pfu_aug1.0_3.1_00046 |
|---|---|
| Locus | scaffold3.1 : 285837 ... 301465 : - |
| To GenomeBrowser | scaffold3.1:285837..301465 |
| Genes list of scaffold | scaffold3.1 |
| Synonym | pfu_aug2.0_863.1_11250 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3.1_00046.t1 | 2 | 1 | SNF | 34 | 205 | 0.0 | 294.2 | 0.0 | 0.0 | 220.4 |
| pfu_aug1.0_3.1_00046.t1 | 2 | 2 | SNF | 264 | 321 | 0.0 | 294.2 | 5.5e-25 | 4.1e-21 | 75.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3.1_00046.t1 | gi|260822645|ref|XP_002606712.1| | hypothetical protein BRAFLDRAFT_281662 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_3.1_00046.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3.1_00046.t1 atgtacgacaaaagaaggaccgaagaacaacccatcaacggccaaggaaacgatgcttttgacgtagaagatgacgtcat tttggatgatatagaatccagggatgtctggtcggggaaactggactttatactttcctgtgttggatacgctgtgggat taggaaatatatggcgatttccttatctgtgctataaaaatggtggaggggcatttttcatcccctacctcctatttctt gtttgtggaggtatacctattcttatgctagaggtcggacttggacaatacaccagactcggtggattggtagcatggaa tatatgtccacttttccaaggtattggagtagcgacgttggttgtaaatgtcctactttacatatattacatcattatac tttcctgggcagcttattacctggttcacagcttttctacagttctaccgtggtctacatgtaacaacgattggaacact gataggtgttcaccacatagaagtaggcttatactaaacaaccaaacagctggagttatctcaacgaacgtatcatctaa tatttcatcgaatatcttatctaatttaacgagtgctttcaacgtatcatccgacttgaccaatacatcaacagtcgacc ccacggtggaattttgggacatacgacaagttgagttttcagaaaatgaagctggcgacgacttagttttcagaaaacga aatagtattggcgggacttcattgcacagagagtttagaggagattttgaggcgagttctatagtacatacagatggcgc tgcgaatgggatagtgtactaccttaagccagatctaactcgcctaaaggatccacaggtatggatagacggagggaccc agattttcttctcctatgccatagctctgggcggcatgattggactgggcagttacaacaagtttaataataatttctac agagtcgaagaaaatggatga |
|
Protein
| Protein ID | pfu_aug1.0_3.1_00046.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3.1_00046.t1 MYDKRRTEEQPINGQGNDAFDVEDDVILDDIESRDVWSGKLDFILSCVGYAVGLGNIWRFPYLCYKNGGGAFFIPYLLFL VCGGIPILMLEVGLGQYTRLGGLVAWNICPLFQGIGVATLVVNVLLYIYYIIILSWAAYYLVHSFSTVLPWSTCNNDWNT DRCSPHRSRLILNNQTAGVISTNVSSNISSNILSNLTSAFNVSSDLTNTSTVDPTVEFWDIRQVEFSENEAGDDLVFRKR NSIGGTSLHREFRGDFEASSIVHTDGAANGIVYYLKPDLTRLKDPQVWIDGGTQIFFSYAIALGGMIGLGSYNKFNNNFY RVEENG |
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