Gene
| Gene Model ID | pfu_aug1.0_3001.1_23138 |
|---|---|
| Locus | scaffold3001.1 : 1 ... 7902 : + |
| To GenomeBrowser | scaffold3001.1:1..7902 |
| Genes list of scaffold | scaffold3001.1 |
| Synonym | pfu_aug2.0_217.1_23679 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3001.1_23138.t1 | 5 | 1 | TPR_12 | 21 | 85 | 2.90069e-43 | 145.6 | 3.2e-07 | 0.0002 | 21.1 |
| pfu_aug1.0_3001.1_23138.t1 | 4 | 1 | TPR_11 | 23 | 72 | 2.8e-16 | 58.8 | 0.089 | 57.0 | 3.4 |
| pfu_aug1.0_3001.1_23138.t1 | 5 | 1 | TPR_14 | 27 | 51 | 3.9e-07 | 30.1 | 0.68 | 440.0 | 2.0 |
| pfu_aug1.0_3001.1_23138.t1 | 6 | 1 | TPR_2 | 38 | 51 | 2.8e-16 | 58.0 | 0.82 | 530.0 | 0.9 |
| pfu_aug1.0_3001.1_23138.t1 | 6 | 1 | TPR_1 | 38 | 51 | 9.7e-15 | 53.4 | 0.61 | 400.0 | 0.8 |
| pfu_aug1.0_3001.1_23138.t1 | 4 | 1 | TPR_16 | 45 | 88 | 1.2e-06 | 28.9 | 0.073 | 47.0 | 4.8 |
| pfu_aug1.0_3001.1_23138.t1 | 6 | 2 | TPR_2 | 65 | 87 | 2.8e-16 | 58.0 | 0.025 | 16.0 | 5.7 |
| pfu_aug1.0_3001.1_23138.t1 | 6 | 2 | TPR_1 | 65 | 81 | 9.7e-15 | 53.4 | 0.99 | 640.0 | 0.2 |
| pfu_aug1.0_3001.1_23138.t1 | 4 | 2 | TPR_11 | 88 | 149 | 2.8e-16 | 58.8 | 1.0e-06 | 0.00065 | 19.3 |
| pfu_aug1.0_3001.1_23138.t1 | 4 | 2 | TPR_16 | 88 | 148 | 1.2e-06 | 28.9 | 0.017 | 11.0 | 6.8 |
| pfu_aug1.0_3001.1_23138.t1 | 5 | 2 | TPR_12 | 89 | 150 | 2.90069e-43 | 145.6 | 3.7e-11 | 2.4e-08 | 33.7 |
| pfu_aug1.0_3001.1_23138.t1 | 4 | 1 | TPR_10 | 91 | 117 | 2.6e-11 | 43.0 | 0.62 | 400.0 | 1.1 |
| pfu_aug1.0_3001.1_23138.t1 | 5 | 1 | TPR_7 | 91 | 105 | 3.1e-10 | 39.0 | 0.25 | 160.0 | 2.4 |
| pfu_aug1.0_3001.1_23138.t1 | 2 | 1 | Apc3 | 108 | 182 | 2.1e-11 | 43.8 | 4.5e-06 | 0.0029 | 17.6 |
| pfu_aug1.0_3001.1_23138.t1 | 5 | 3 | TPR_12 | 116 | 193 | 2.90069e-43 | 145.6 | 1.1e-16 | 7.4e-14 | 51.4 |
| pfu_aug1.0_3001.1_23138.t1 | 4 | 2 | TPR_10 | 122 | 150 | 2.6e-11 | 43.0 | 1.2e-05 | 0.0078 | 16.1 |
| pfu_aug1.0_3001.1_23138.t1 | 6 | 3 | TPR_2 | 123 | 149 | 2.8e-16 | 58.0 | 6.7e-06 | 0.0043 | 16.8 |
| pfu_aug1.0_3001.1_23138.t1 | 6 | 3 | TPR_1 | 123 | 149 | 9.7e-15 | 53.4 | 3.1e-08 | 2.0e-05 | 24.0 |
| pfu_aug1.0_3001.1_23138.t1 | 5 | 2 | TPR_7 | 123 | 148 | 3.1e-10 | 39.0 | 6.0e-05 | 0.039 | 13.7 |
| pfu_aug1.0_3001.1_23138.t1 | 4 | 3 | TPR_11 | 124 | 189 | 2.8e-16 | 58.8 | 5.3e-11 | 3.4e-08 | 33.0 |
| pfu_aug1.0_3001.1_23138.t1 | 4 | 1 | TPR_8 | 124 | 150 | 8.4e-12 | 43.9 | 8.5e-08 | 5.5e-05 | 22.6 |
| pfu_aug1.0_3001.1_23138.t1 | 5 | 2 | TPR_14 | 129 | 148 | 3.9e-07 | 30.1 | 0.13 | 84.0 | 4.2 |
| pfu_aug1.0_3001.1_23138.t1 | 3 | 1 | TPR_19 | 133 | 190 | 9.2e-08 | 32.3 | 2.2e-05 | 0.014 | 15.6 |
| pfu_aug1.0_3001.1_23138.t1 | 4 | 3 | TPR_10 | 163 | 192 | 2.6e-11 | 43.0 | 2.4e-05 | 0.015 | 15.1 |
| pfu_aug1.0_3001.1_23138.t1 | 5 | 4 | TPR_12 | 165 | 234 | 2.90069e-43 | 145.6 | 2.3e-12 | 1.5e-09 | 37.6 |
| pfu_aug1.0_3001.1_23138.t1 | 6 | 4 | TPR_1 | 165 | 182 | 9.7e-15 | 53.4 | 0.00023 | 0.15 | 11.7 |
| pfu_aug1.0_3001.1_23138.t1 | 6 | 4 | TPR_2 | 166 | 190 | 2.8e-16 | 58.0 | 5.2e-05 | 0.034 | 14.0 |
| pfu_aug1.0_3001.1_23138.t1 | 4 | 3 | TPR_16 | 166 | 183 | 1.2e-06 | 28.9 | 0.038 | 24.0 | 5.7 |
| pfu_aug1.0_3001.1_23138.t1 | 4 | 2 | TPR_8 | 168 | 190 | 8.4e-12 | 43.9 | 0.0019 | 1.2 | 9.0 |
| pfu_aug1.0_3001.1_23138.t1 | 5 | 3 | TPR_7 | 168 | 182 | 3.1e-10 | 39.0 | 0.021 | 13.0 | 5.8 |
| pfu_aug1.0_3001.1_23138.t1 | 5 | 3 | TPR_14 | 168 | 195 | 3.9e-07 | 30.1 | 0.013 | 8.3 | 7.3 |
| pfu_aug1.0_3001.1_23138.t1 | 3 | 2 | TPR_19 | 185 | 234 | 9.2e-08 | 32.3 | 0.028 | 18.0 | 5.7 |
| pfu_aug1.0_3001.1_23138.t1 | 5 | 5 | TPR_12 | 204 | 274 | 2.90069e-43 | 145.6 | 5.8e-10 | 3.7e-07 | 29.9 |
| pfu_aug1.0_3001.1_23138.t1 | 4 | 4 | TPR_11 | 206 | 275 | 2.8e-16 | 58.8 | 1.8e-07 | 0.00012 | 21.6 |
| pfu_aug1.0_3001.1_23138.t1 | 6 | 5 | TPR_2 | 208 | 234 | 2.8e-16 | 58.0 | 0.011 | 7.0 | 6.8 |
| pfu_aug1.0_3001.1_23138.t1 | 5 | 4 | TPR_14 | 208 | 233 | 3.9e-07 | 30.1 | 0.062 | 40.0 | 5.2 |
| pfu_aug1.0_3001.1_23138.t1 | 6 | 5 | TPR_1 | 209 | 234 | 9.7e-15 | 53.4 | 0.01 | 6.5 | 6.5 |
| pfu_aug1.0_3001.1_23138.t1 | 4 | 3 | TPR_8 | 209 | 234 | 8.4e-12 | 43.9 | 0.033 | 21.0 | 5.1 |
| pfu_aug1.0_3001.1_23138.t1 | 4 | 4 | TPR_16 | 209 | 275 | 1.2e-06 | 28.9 | 0.015 | 9.6 | 7.0 |
| pfu_aug1.0_3001.1_23138.t1 | 2 | 2 | Apc3 | 210 | 269 | 2.1e-11 | 43.8 | 1.1e-08 | 7.4e-06 | 26.0 |
| pfu_aug1.0_3001.1_23138.t1 | 5 | 4 | TPR_7 | 210 | 231 | 3.1e-10 | 39.0 | 0.0083 | 5.3 | 7.0 |
| pfu_aug1.0_3001.1_23138.t1 | 3 | 3 | TPR_19 | 217 | 275 | 9.2e-08 | 32.3 | 0.00031 | 0.2 | 12.0 |
| pfu_aug1.0_3001.1_23138.t1 | 5 | 5 | TPR_14 | 248 | 276 | 3.9e-07 | 30.1 | 0.39 | 250.0 | 2.7 |
| pfu_aug1.0_3001.1_23138.t1 | 6 | 6 | TPR_2 | 250 | 276 | 2.8e-16 | 58.0 | 0.00016 | 0.1 | 12.5 |
| pfu_aug1.0_3001.1_23138.t1 | 4 | 4 | TPR_8 | 250 | 276 | 8.4e-12 | 43.9 | 0.00085 | 0.55 | 10.1 |
| pfu_aug1.0_3001.1_23138.t1 | 5 | 5 | TPR_7 | 251 | 273 | 3.1e-10 | 39.0 | 0.16 | 100.0 | 3.0 |
| pfu_aug1.0_3001.1_23138.t1 | 6 | 6 | TPR_1 | 252 | 276 | 9.7e-15 | 53.4 | 0.00042 | 0.27 | 10.9 |
| pfu_aug1.0_3001.1_23138.t1 | 4 | 4 | TPR_10 | 253 | 277 | 2.6e-11 | 43.0 | 0.84 | 540.0 | 0.7 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_3001.1_23138.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3001.1_23138.t1 cggaaggactttgcttctttgatcaatgtctcacgcttacgcaaaacttcaagagaaaactagatgaggcctacatccat acagcgtacggaagcgccttcacaaatgtcataggaaacttagttaaaggtgaaaaacattatcgggaagctttgggaat acttttggagacaaaaacacgtgattaccatatggctgaagcatatcaaagaattggatggaacttagggatacaaggaa aatatttcgatgccttgggaaaatactttaaaggggacttcaaagaagcagagaaacttcacttcgaaaatcttcgtaga aggagattagtgtacaagacagacaatcacccatacatcggttcagtgatgaataacattgggctaatgtaccagagaat gggaaatatggaaaaagcatttgaatacttcagaaagggactagacatcaaactggcaaaccacgccaatgaaaaggcca tcattttatcacaaaaaaatgtggctaactgtttgtctcgcatgggacggtatgatgaagctatgcaggaaatggataaa gcaatgaaaatgcttgaaaagttcccaggtcgatatgtggaggttagggctattgcaattgatggaaaggcaagaatata tatacacaagagagatttccatagggcaattcatatgcttaaacaaggcatcgaaataagaaaagatttatcacccgaga atatcaacactgtggagaatattgtcctgtatgcaaaggcctgttttcatcttgcgaaatattcagaagcgaaagagaac attgaaaaggtgctggaaatgcaaccaaggctaagtaaaactcaccctagagaattttgtgtaatagaatgtgtcaaatt aggagtggaattttactcacgaagcactgatgcggaatcactcgaaagagtcttcagattaggaattgaagagcttgatc gtctttatagagagttcgaaaaacatgaaatagaagagagatatacgacgtcacagttaaaatttacgtcaaatgttgtc atgtcgggtcttaggatgcgtaaaatacaagtcaactgcggtaatgtgaaaatcgtctattga |
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Protein
| Protein ID | pfu_aug1.0_3001.1_23138.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3001.1_23138.t1 EGLCFFDQCLTLTQNFKRKLDEAYIHTAYGSAFTNVIGNLVKGEKHYREALGILLETKTRDYHMAEAYQRIGWNLGIQGK YFDALGKYFKGDFKEAEKLHFENLRRRRLVYKTDNHPYIGSVMNNIGLMYQRMGNMEKAFEYFRKGLDIKLANHANEKAI ILSQKNVANCLSRMGRYDEAMQEMDKAMKMLEKFPGRYVEVRAIAIDGKARIYIHKRDFHRAIHMLKQGIEIRKDLSPEN INTVENIVLYAKACFHLAKYSEAKENIEKVLEMQPRLSKTHPREFCVIECVKLGVEFYSRSTDAESLERVFRLGIEELDR LYREFEKHEIEERYTTSQLKFTSNVVMSGLRMRKIQVNCGNVKIVY |
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