Gene
| Gene Model ID | pfu_aug1.0_301.1_14959 |
|---|---|
| Locus | scaffold301.1 : 77025 ... 85185 : - |
| To GenomeBrowser | scaffold301.1:77025..85185 |
| Genes list of scaffold | scaffold301.1 |
| Synonym | pfu_aug2.0_340.1_00623 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_301.1_14959.t1 | 1 | 1 | THF_DHG_CYH | 8 | 67 | 1.5e-20 | 73.4 | 3.1e-24 | 2.3e-20 | 72.7 |
| pfu_aug1.0_301.1_14959.t1 | 2 | 1 | THF_DHG_CYH_C | 71 | 100 | 0.0 | 161.3 | 1.2e-08 | 8.6e-05 | 21.6 |
| pfu_aug1.0_301.1_14959.t1 | 2 | 2 | THF_DHG_CYH_C | 101 | 207 | 0.0 | 161.3 | 4.2039e-45 | 2.89999e-41 | 140.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_301.1_14959.t1 | gi|351698806|gb|EHB01725.1| | Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial [Heterocephalus glaber] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_301.1_14959.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_301.1_14959.t1 atgatgatgaaaggcaatactagaatcgagagtaggagtatattcttaccagctgagacaacagaatcagaacttctcaa gacgatagacgatctaaataacgatgattctgtagatggaatcctagtgcagcttcctgtgccagaccatataacggaga ggaaagtttgtaatgctgtagctcctcataaagacgtagatggatttaatgttataaacgtaggacgattctgttcagat cagatgacttttataccggctacaccagcaggagtaatggagatgatcagacgtacaggtgatgctaccacgacaatatg tcacaggtatacaccccctgaacagctgcccgtgtttactaagacggcagacatcgttgttgtcgctacaggcattccaa agctgataactgctgatatcattaaagagggggcgactatcattgatgtaggaattaaccgaatcaaagatgagaaaaca gggaaaactaaacttgttggtgatgtggattttgaagaggtttcgaagaaagcaggttacatcacacctgtacctggggg agttggtcctatgacagttgcgatgctgaccaagaacacactgatggcttataaaaaggagattaattttgattga |
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Protein
| Protein ID | pfu_aug1.0_301.1_14959.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_301.1_14959.t1 MMMKGNTRIESRSIFLPAETTESELLKTIDDLNNDDSVDGILVQLPVPDHITERKVCNAVAPHKDVDGFNVINVGRFCSD QMTFIPATPAGVMEMIRRTGDATTTICHRYTPPEQLPVFTKTADIVVVATGIPKLITADIIKEGATIIDVGINRIKDEKT GKTKLVGDVDFEEVSKKAGYITPVPGGVGPMTVAMLTKNTLMAYKKEINFD |
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