Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_301.1_14961
Locus scaffold301.1 : 103826 ... 115226 : +
To GenomeBrowser scaffold301.1:103826..115226
Genes list of scaffold scaffold301.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_301.1_14961.t1 1 1 FYVE 43 82 7.0e-13 48.2 1.1e-15 9.3e-13 47.8

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_301.1_14961.t1 gi|291228579|ref|XP_002734254.1| 8.0e-17

Transcript
Transcript IDpfu_aug1.0_301.1_14961.t1
Definition-
>pfu_aug1.0_301.1_14961.t1
atgaagcaagagacagaaatggcgttacgtattctggaaaaagatattcatgagaaacaggatacaatgatctcactacg
caaacaactagaagaaatcaaagctatcaacctggaaatgtaccaaaaattacagcatcactgtcggaactgtggagaaa
tattctgtaatgagtgttcggacaataaaatgccgttaccctcatcagccaagccggtgcgagtctgtgataattgtcag
acattactgcttcagaggtactcctcagcggggaactga

Protein
Protein IDpfu_aug1.0_301.1_14961.t1
Definition-
>pfu_aug1.0_301.1_14961.t1
MKQETEMALRILEKDIHEKQDTMISLRKQLEEIKAINLEMYQKLQHHCRNCGEIFCNECSDNKMPLPSSAKPVRVCDNCQ
TLLLQRYSSAGN

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