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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_3012.1_01294
Locus scaffold3012.1 : 49636 ... 73838 : +
To GenomeBrowser scaffold3012.1:49636..73838
Genes list of scaffold scaffold3012.1
Synonym pfu_aug2.0_400.1_00701

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_3012.1_01294.t1 gi|291238496|ref|XP_002739165.1| 0.0

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 2
egg-4cell 1
8-16cell 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_3012.1_01294.t1
Definition-
>pfu_aug1.0_3012.1_01294.t1
atggactttgtggacttggatcaactgagcaatatgaaatatgatgcatccttagataacatgtgggaaggtaacaagat
gaacattcctcaccggatcctgacacctgatgacccggatgtggattttccaggaaagtcgatagagagcgactccagta
cagaatttgtcactccgcagtcgtcttatgctgacgctttatcaaggaaagacaagtctacctacgagaaaatggcagag
ttattttcggagacagataatcgtcagaaattacgcgactacatggacaacatcaaacttccatgtatcccttatctaga
tttcctgccagtattagaacatgtccagaattatttgagatccgtacgatatatagaagagttgcagaagtttgttgagg
atgataattacaaactctccctgaaggtggagccacctattcagggtcagacattgtccacatccaaggaggacatacag
atcttgatgaccccagcgtcaccagccacagaaccaaggtcacagaacgccctaactccaggaaacacagcatcaggggc
gatatgtgggggctgctctaagtttgctcccggacacaggaaaactaagagtttaagtgctaactttatgagtggccagc
acaagccatttgcagagaaaacgttcagtcttccatccaccaccaccgctccctacatccagggtgtacgacatctactg
gacgacagcgtgctggaggaatcaccgtgcgcttccagtgatggatctatatgtggaaaattctccaccgatggagaggt
gttcgattccacatccacggaagattcttccaattggtcagccaaaactttagttcaatggagggaatcagatgacctcc
aaaataactttcagcaaacctatacgtgtgaggggtgtgtccgaagaaaaactatactaaaagacggcaaaaaacctaca
gtcagtgcgtggaccaggtattggttagccttgtggggtacatccttattatactatcctgctaaaactatgcgtgctag
tgataggtcagggtttaagtcggagcccagtaagatgacgtcggttgttggttggatggttgtgatgggagataaccccc
ttcaaccagacgcgttccagctaacggacccagccaagggtaatgtgtacaagttcagggcgggaagtcaggcacaggcc
ttaacatggtgcagacatcttagtgatgcagccaaaagattccaacctcagactccagccaatctgatgtcttttgactg
a

Protein
Protein IDpfu_aug1.0_3012.1_01294.t1
Definition-
>pfu_aug1.0_3012.1_01294.t1
MDFVDLDQLSNMKYDASLDNMWEGNKMNIPHRILTPDDPDVDFPGKSIESDSSTEFVTPQSSYADALSRKDKSTYEKMAE
LFSETDNRQKLRDYMDNIKLPCIPYLDFLPVLEHVQNYLRSVRYIEELQKFVEDDNYKLSLKVEPPIQGQTLSTSKEDIQ
ILMTPASPATEPRSQNALTPGNTASGAICGGCSKFAPGHRKTKSLSANFMSGQHKPFAEKTFSLPSTTTAPYIQGVRHLL
DDSVLEESPCASSDGSICGKFSTDGEVFDSTSTEDSSNWSAKTLVQWRESDDLQNNFQQTYTCEGCVRRKTILKDGKKPT
VSAWTRYWLALWGTSLLYYPAKTMRASDRSGFKSEPSKMTSVVGWMVVMGDNPLQPDAFQLTDPAKGNVYKFRAGSQAQA
LTWCRHLSDAAKRFQPQTPANLMSFD

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