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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_30136.1_19347
Locus scaffold30136.1 : 1 ... 7192 : +
To GenomeBrowser scaffold30136.1:1..7192
Genes list of scaffold scaffold30136.1
Synonym pfu_aug2.0_32.1_06796

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_30136.1_19347.t1 gi|158292748|ref|XP_001230977.2| AGAP005200-PA [Anopheles gambiae str. PEST] 3.0e-26

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 21
egg-4cell 2
8-16cell 4
egg-Dshape 4
trochophore 3
>Adult tissues
Dshape 4
adductorMuscle 3
maleGonad 1
mantle 2
pearlSac 1

Transcript
Transcript IDpfu_aug1.0_30136.1_19347.t1
Definition-
>pfu_aug1.0_30136.1_19347.t1
acatttgacgctgttacaggcaaaatgtgcaacgtgaatgcaaataaaaatgacagaataaatgtaaatgtaagtaatga
ctgtcttacttttggtgttcatgggtgtataattctggttggacacgtgcaaattttccgagaatggcttcgcgattcac
agaatttgcatgtgaccaaccagaattatacacccatgaacaccaaaaatatggcctctgcctatcatctttattggaaa
tctgatctttggtttgggaggaacaaaacaactcaggaccttgggaagtatggcctgttgttttataactcattcttcat
gctggtacctgtattagtcctggcttattgtaccggtgacattgacaagggcttgaattacgatggctggcacaatccct
ggttcttgttgcagttttcattatcgtgctgtatgggatttgtgcttaattactcaattgtgctgtgtacgcagcacaac
tcagcacttaccaccaatatagttggtgtcatcaag

Protein
Protein IDpfu_aug1.0_30136.1_19347.t1
Definition-
>pfu_aug1.0_30136.1_19347.t1
TFDAVTGKMCNVNANKNDRINVNVSNDCLTFGVHGCIILVGHVQIFREWLRDSQNLHVTNQNYTPMNTKNMASAYHLYWK
SDLWFGRNKTTQDLGKYGLLFYNSFFMLVPVLVLAYCTGDIDKGLNYDGWHNPWFLLQFSLSCCMGFVLNYSIVLCTQHN
SALTTNIVGVIK

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