Gene
| Gene Model ID | pfu_aug1.0_3017.1_01301 |
|---|---|
| Locus | scaffold3017.1 : 73196 ... 87664 : + |
| To GenomeBrowser | scaffold3017.1:73196..87664 |
| Genes list of scaffold | scaffold3017.1 |
| Synonym | pfu_aug2.0_93.1_10256 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3017.1_01301.t1 | 1 | 1 | Homeobox | 172 | 228 | 3.7e-20 | 71.2 | 9.4e-24 | 6.9e-20 | 70.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3017.1_01301.t1 | gi|165873671|gb|ABY67960.1| | post2 hox protein [Capitella teleta] | 4.99983e-42 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_3017.1_01301.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3017.1_01301.t1 atggaagcggccggaaataaccttctagcgcactccgcacttccgttttatcaaaacggtttaacaacttccgtttccag tatcttatcgtcaagtcccggcgctcaggatagccttacccgcccctcgggtctctccggtcagaacggatggtcgggtt ataacagtgacgcccataactcttgttccatgtcttcatacggtaacttacaattaggagcttcgttctccgccaaatcc ccgtataatacattcgctagtgctgcgagtgcggactatataaccaactgtagacaaatgcagttaaatcatatgaaccc tttgaatgcagttccagctgcaatgaggaattatccccctttgtatggggacatgtaccccgccacccacccggccgggt accccaatggcagcttctattcagacatgcctcccggaattccacctctgcccggaagggagctagattgtagaagccca aattccgagtcatcgaatcaagaaaccaaaggtagaaagaagaggaagccgtacacgaggtaccagactatggttctaga aaacgagtttttgaacagttcttatatcacaagacaaaaaaggtgggagatatcgtgcaaactgcaactatcagaacgtc aagtgaaagtttggtttcagaaccggagaatgaaacgaaaaaagttaaatgaacgtgcaaaagctcgaatacgtgacgat gacgtcaaagaccatcacgtgattcaaggacaacatcatccccaagtagtacaagcgtga |
|
Protein
| Protein ID | pfu_aug1.0_3017.1_01301.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3017.1_01301.t1 MEAAGNNLLAHSALPFYQNGLTTSVSSILSSSPGAQDSLTRPSGLSGQNGWSGYNSDAHNSCSMSSYGNLQLGASFSAKS PYNTFASAASADYITNCRQMQLNHMNPLNAVPAAMRNYPPLYGDMYPATHPAGYPNGSFYSDMPPGIPPLPGRELDCRSP NSESSNQETKGRKKRKPYTRYQTMVLENEFLNSSYITRQKRWEISCKLQLSERQVKVWFQNRRMKRKKLNERAKARIRDD DVKDHHVIQGQHHPQVVQA |
|