Gene
| Gene Model ID | pfu_aug1.0_3019.1_30323 |
|---|---|
| Locus | scaffold3019.1 : 18936 ... 27209 : + |
| To GenomeBrowser | scaffold3019.1:18936..27209 |
| Genes list of scaffold | scaffold3019.1 |
| Synonym | pfu_aug2.0_205.1_17112 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3019.1_30323.t1 | 1 | 1 | Glyco_transf_7N | 5 | 55 | 1.2e-19 | 70.0 | 3.6e-23 | 1.8e-19 | 69.4 |
| pfu_aug1.0_3019.1_30323.t1 | 2 | 1 | Glyco_tranf_2_2 | 6 | 80 | 2.2e-07 | 30.2 | 2.0e-06 | 0.0099 | 14.9 |
| pfu_aug1.0_3019.1_30323.t1 | 1 | 1 | Glyco_transf_7C | 59 | 136 | 1.7e-22 | 78.6 | 5.9e-26 | 2.9e-22 | 77.9 |
| pfu_aug1.0_3019.1_30323.t1 | 2 | 2 | Glyco_tranf_2_2 | 74 | 123 | 2.2e-07 | 30.2 | 9.0e-07 | 0.0045 | 16.1 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3019.1_30323.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3019.1_30323.t1 atgaagacttcaatcgtaaagaaggttggcacaacaaatttcaacagaggcatgctacgtaacattggttacattgaagc tctgaaattagaagattttgactgtttcgttttccatgacgtggatttgattccagagaatgaccagaatttatacatgt gtgacggaagtctacgtcagttgtcgtctgccattgatgaatggagataccacgtcatatactataacagcgcgggaggt gtggtgatagtgagtaaagagacgtttctgttgatgaatggatatccacacttgtactggatatggggaggggaagacga cgaattctgtcttagagctaagcaccacggagtgatccttaccagaccttcagcggacattggaaaatacaaagcgattc cccacaaaaagtccccaaagggagatgctctataccttctaagtaagtggagtcataggttggactcagatggactgacg tcacttcccggtagctatcggataacacagacgacgggacatgaaatgtacaccaatatatctgtggatgtgctggtgga accagacagcggcggtagatctgcaccaccttatctatggtgggctgactgggacttcatcatatggtgttttggacatt tttttccctga |
|
Protein
| Protein ID | pfu_aug1.0_3019.1_30323.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3019.1_30323.t1 MKTSIVKKVGTTNFNRGMLRNIGYIEALKLEDFDCFVFHDVDLIPENDQNLYMCDGSLRQLSSAIDEWRYHVIYYNSAGG VVIVSKETFLLMNGYPHLYWIWGGEDDEFCLRAKHHGVILTRPSADIGKYKAIPHKKSPKGDALYLLSKWSHRLDSDGLT SLPGSYRITQTTGHEMYTNISVDVLVEPDSGGRSAPPYLWWADWDFIIWCFGHFFP |
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