Gene
| Gene Model ID | pfu_aug1.0_30250.1_62598 |
|---|---|
| Locus | scaffold30250.1 : 630 ... 6939 : - |
| To GenomeBrowser | scaffold30250.1:630..6939 |
| Genes list of scaffold | scaffold30250.1 |
| Synonym | pfu_aug2.0_300.1_00563 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_30250.1_62598.t1 | 2 | 1 | DHC_N2 | 1 | 142 | 1.2e-35 | 122.7 | 2.6e-37 | 1.3e-34 | 119.4 |
| pfu_aug1.0_30250.1_62598.t1 | 2 | 1 | AAA_6 | 176 | 249 | 0.0 | 252.0 | 3.6e-30 | 1.8e-27 | 96.4 |
| pfu_aug1.0_30250.1_62598.t1 | 2 | 1 | AAA_5 | 214 | 241 | 1.4e-10 | 41.0 | 0.0015 | 0.72 | 9.5 |
| pfu_aug1.0_30250.1_62598.t1 | 2 | 1 | AAA_17 | 214 | 238 | 6.4e-07 | 30.2 | 9.7e-05 | 0.048 | 14.4 |
| pfu_aug1.0_30250.1_62598.t1 | 2 | 2 | AAA_6 | 246 | 355 | 0.0 | 252.0 | 0.0 | 0.0 | 157.6 |
| pfu_aug1.0_30250.1_62598.t1 | 2 | 2 | AAA_5 | 441 | 554 | 1.4e-10 | 41.0 | 2.0e-09 | 1.0e-06 | 28.5 |
| pfu_aug1.0_30250.1_62598.t1 | 2 | 2 | AAA_17 | 442 | 522 | 6.4e-07 | 30.2 | 0.00033 | 0.16 | 12.7 |
| pfu_aug1.0_30250.1_62598.t1 | 2 | 2 | DHC_N2 | 499 | 550 | 1.2e-35 | 122.7 | 0.18 | 91.0 | 1.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_30250.1_62598.t1 | gi|345323110|ref|XP_003430673.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_30250.1_62598.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_30250.1_62598.t1 atgccccgtgaggtcaagtccatgcaggcagctagagctgtagaatctaagatgaaggagttcaaggactcgttaccttt atttgttgaccttaaacatgatgctctcagggatcgccattggaaagaactgatgacaaagacaggccagaagtttgata taaatcctgagaccttcaccttggccaatgtatttgccatggagcttcaccgtttccatgaagccattggagagattgtc accaaagctagcaaggaaatgggtatcgaaaagggagtgaaagaagtagaggaacaatggagcaatatgaagttctcagt tcacccgtacatgaagggcacatctaaccgagggtggatcctgggtgcggtagatgaaatcttacagatcctggatgaca gtgctatgaacctggccagtattattatggatgccaaagagtttgagtgggagagtcagctgagattttactgggagaag gaaccagacgagttgttagtccgacagtgtaccggagaatttggctacggttatgagtacatgggtctgaatggacgtct ggtcattactccactgactgacagaatctatctgaccttgacccaggctctgtccatgaacttgggaggggcacctgccg gcccagcagggacaggtaaaacggagacagtaaaggatttagccaaggccctgggtctgttatgtgtggtcaccaactgt ggagagggtatggactttaagtttgaaggccaggagattaacatggatttacgtgtgggtatcttcatcaccatgaaccc tggttacgccggtcgtactgagctaccagagtcagtcaaagccttgttccgtccagtcgtggtaatcgtacctgatctcc aacagatctgtgagattatgttgttctctgagggtttcctgacggctaaagtactggccaagaagatgactgtgttatat aagctagctaaggaacagttgtctaagcagtatcattatgactttggtctgagagctctcaagtctgtgttggtcatggc tggtgatctcaagagaggatcccctgatcttgctgaggatgtggtactgatgagagccctccgtgacatgaatctaccca aatttgtgtttgaggacgtaccgttattcttgggtctgatcggagatttattcccaggattagactgcccgcgtgtcaga tatcctaactttaacgatgccgtagaggcggtactggaggataatggatacatacaactaccagtacaggttgacaaagt agtacagttatatgaaaccatgatgacacgtcatacaaccatgattgtgggacccacagggggaggtaaatctgtggtca tcaacaccttggctcaggctcaaaccagactgggtctccaaacaaagctgtacaccataaaccctaaagacaggagtgtg atagaactgtacggtatcctagatcccatcaccagagactggacagacggactgctctctaacatattcagagaaatcaa caaaccgacagacaaaaacgagaagaagtacatcgtgtatgatggtgatgtagatgcattgtgggtagagaacatgaact ccgtcatggacgacaacaaactgatgacattagccaatggagaaagaatccgtcttcagaaacactgtgccatgttgttt gaagtaagaagaatgacaattttttcaaacatcttcgttactgagcttaatggaatttacaaaaacaaattttcacaatg a |
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Protein
| Protein ID | pfu_aug1.0_30250.1_62598.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_30250.1_62598.t1 MPREVKSMQAARAVESKMKEFKDSLPLFVDLKHDALRDRHWKELMTKTGQKFDINPETFTLANVFAMELHRFHEAIGEIV TKASKEMGIEKGVKEVEEQWSNMKFSVHPYMKGTSNRGWILGAVDEILQILDDSAMNLASIIMDAKEFEWESQLRFYWEK EPDELLVRQCTGEFGYGYEYMGLNGRLVITPLTDRIYLTLTQALSMNLGGAPAGPAGTGKTETVKDLAKALGLLCVVTNC GEGMDFKFEGQEINMDLRVGIFITMNPGYAGRTELPESVKALFRPVVVIVPDLQQICEIMLFSEGFLTAKVLAKKMTVLY KLAKEQLSKQYHYDFGLRALKSVLVMAGDLKRGSPDLAEDVVLMRALRDMNLPKFVFEDVPLFLGLIGDLFPGLDCPRVR YPNFNDAVEAVLEDNGYIQLPVQVDKVVQLYETMMTRHTTMIVGPTGGGKSVVINTLAQAQTRLGLQTKLYTINPKDRSV IELYGILDPITRDWTDGLLSNIFREINKPTDKNEKKYIVYDGDVDALWVENMNSVMDDNKLMTLANGERIRLQKHCAMLF EVRRMTIFSNIFVTELNGIYKNKFSQ |
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