Gene
| Gene Model ID | pfu_aug1.0_30432.1_69963 |
|---|---|
| Locus | scaffold30432.1 : 1631 ... 9725 : - |
| To GenomeBrowser | scaffold30432.1:1631..9725 |
| Genes list of scaffold | scaffold30432.1 |
| Synonym | pfu_aug2.0_4.1_13333 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_30432.1_69963.t1 | 3 | 1 | CPL | 120 | 120 | 0.0 | 167.8 | 0.21 | 3100.0 | -2.2 |
| pfu_aug1.0_30432.1_69963.t1 | 3 | 2 | CPL | 187 | 212 | 0.0 | 167.8 | 0.35 | 5300.0 | -2.9 |
| pfu_aug1.0_30432.1_69963.t1 | 3 | 3 | CPL | 225 | 370 | 0.0 | 167.8 | 0.0 | 0.0 | 165.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_30432.1_69963.t1 | gi|156388244|ref|XP_001634611.1| | predicted protein [Nematostella vectensis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 2 |
| 8-16cell | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_30432.1_69963.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_30432.1_69963.t1 atggcaaaatcaagatatgccaagttccttgtcaaaaagtttctcatttacgggtcaaagaatcacaaaaataatgtgat caagagtttccatgggaatgttagaaaactagtcagacataaggaagctgctgatgtgatagagttagcttacagtgact atgccaatgctgtacaaaggttatcactactggaggagttctacggaccaagctttactctatttaagaccccagatgta aagtctttagatcagctgttagagatgcagccagataagaaggacatgatcctcagtaatatgaaggaagctctcttacc tctcattgacaagacaatactttcacattcaatggtgcacagactttttcatgagttctttgcccatgcttcagagaaac aaagatctgatatgatagaagctatcagggaaagtgttgtccagataatacacaccagggacggggctcgagcaaccatg tattgtttgtggtacggtacggccaaggacagaaagataataataaagagtttgaaggggaatgtggtgaaggtgtgtat ggacgagtacggacatctggccttgttagctctgtttgatgtggtggacgataccaagatagtacagaaagtcgtactgg aggagatactgaagtcattacatgatgtagcccagaatcagtatggtagaaaggtgatgttatatttgatgtacccacgt gaccctcatcacttccaccctgatatagtcagggtactacaggagggggacaggaatcctaatagtaagaaggacaaatc tgttcgtcaccaggaattattggagtttgtatcaccatctttcctacagtttatagtagaccataccagggagttagtaa tggagaatgcttctctagtacttataatggccattatctcacatgccaaaggtgatcccacagcagccatggaagcagtg gctagaattgccgctgagccatttgtggctggaagtctggagaatcagcatattgtagaacattctgcgggtcacatgac cttaaaacggctgatacaaaatgatagggacagaatccaacaaggttactctgtcctgttttcacaagtattactgaaga cattaaaagaaggatcactgaagtcctgggcagcttgtaacaganttcagaaggtgccaataagcatggccggttttaca gttggttgtgcctattga |
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Protein
| Protein ID | pfu_aug1.0_30432.1_69963.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_30432.1_69963.t1 MAKSRYAKFLVKKFLIYGSKNHKNNVIKSFHGNVRKLVRHKEAADVIELAYSDYANAVQRLSLLEEFYGPSFTLFKTPDV KSLDQLLEMQPDKKDMILSNMKEALLPLIDKTILSHSMVHRLFHEFFAHASEKQRSDMIEAIRESVVQIIHTRDGARATM YCLWYGTAKDRKIIIKSLKGNVVKVCMDEYGHLALLALFDVVDDTKIVQKVVLEEILKSLHDVAQNQYGRKVMLYLMYPR DPHHFHPDIVRVLQEGDRNPNSKKDKSVRHQELLEFVSPSFLQFIVDHTRELVMENASLVLIMAIISHAKGDPTAAMEAV ARIAAEPFVAGSLENQHIVEHSAGHMTLKRLIQNDRDRIQQGYSVLFSQVLLKTLKEGSLKSWAACNRXQKVPISMAGFT VGCAY |
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