Gene
| Gene Model ID | pfu_aug1.0_30437.1_33757 |
|---|---|
| Locus | scaffold30437.1 : 286 ... 7154 : + |
| To GenomeBrowser | scaffold30437.1:286..7154 |
| Genes list of scaffold | scaffold30437.1 |
| Synonym | pfu_aug2.0_310.1_00587 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_30437.1_33757.t1 | 2 | 1 | SNF2_N | 403 | 480 | 0.0 | 179.4 | 4.4e-21 | 3.3e-17 | 62.2 |
| pfu_aug1.0_30437.1_33757.t1 | 2 | 2 | SNF2_N | 477 | 624 | 0.0 | 179.4 | 1.0e-37 | 7.5e-34 | 116.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_30437.1_33757.t1 | gi|224052526|ref|XP_002188227.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_30437.1_33757.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_30437.1_33757.t1 atggatgctaaacatctgttagaagatgaagttccctctggtatgaataatggaagcaatgtggatccgaaaagtgaaaa tgaaagtagttcggaagcacctgaagcgaagagtgaacagaattccagatttcatgtaaacagagagctcattcctgtgg cacagctgagtgaaaaccttgtatctgaagagctaaagggacttggattggatgtctttaaccaagatgagtttgaacaa ggtgttatggcacaagttgatgatgctatggcaaaagaggaagaagagagaaaaagaaagcagctggagaaggaagatat ggacatcaaatatgatattgcagaaaagaaaattattacagattttttatcgatgtacatgtatgctcaaggatcaagtt attcagtttatgacctatattggttcaaagtacaggaaactgccactggtgctgaaaatactgaagataccgctgctcag ggaccttcgtcagccaacctagaagaaagtagcaccgattcccaggactctacaaaggaaccagggagcagcaaacatca caaatctcacaagtcaaagaagaaagatttagtttcgtcatccagttcaagggaggaatcaaggaagaaagaaaactttt ttgatgctcgagataaaaggcattataggaacgatgttgagggttcgtactatggagactcatacagaagtaggcagaaa tacaaaataagccataatttcacggaggattctccgatgagcgacgaggaggcatgttaccaagacgatcccgatggata tctgtccgacgagtatagaccaacggagaaagaactgcaggaagcgtcaagtgattctgggctgagcgaagtggatgaac caagtgataacctggaacctaaagagaaaaagtccaagaagagaaaattgtctttacgtcccaagaagccaccaaagttc gtcacgagtgatgatgaaggggatttgtcaggtcttcctctaaaacgtaaagtcagtagggaagcctccgtcagaaccaa ggatgacggtgacgatgatctatacgagttgagaatgagtgattttaatgatgcagaaattctgcgagataaacagatag ctactggagaaatagtggaccctgaggataagacttttgatggtggacttacagtgccggggagaatatggtccaaacta tttgattaccagaaggttggagtcagctggttatgggagcttcactgccagcaagcagggggaataatcggtgatgaaat gggactcggtaaaactattcagatgattgcattcatggcagctcttagacagagtaaacttcgggcaagagacttcagat acaaaggaataggaccctcgttgatcgtatgtcccaccaccgtgatgcagcaatgggatgagttggtgaggaagatagtg aagtgtaatggagtactggtgacgtcgtacaccactctggtgttacatcaagatgctgtactaccgtataactggcatta tgttgtactggatgagggacacaaaatcaggaaccccgatgctcaggctaccctggtgtgtaaacagtttaaaacaccgc acagaattatactatctggctctccaatacaaaacaatctgaaggagttatggtccttgttcgactttatctttcctgga aaacttggaaccttgccagatttcttggcccatttctctgttcccatagtacaaggcggatatgcaaatgcaacagaaat tcaagtacagactgcctataaatgtgcatgtgtcctacgtgataccattaacccatatttactgagacgtatgaaggcag atgtcaagatcaatctaccaagcaaaaatgaacag |
|
Protein
| Protein ID | pfu_aug1.0_30437.1_33757.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_30437.1_33757.t1 MDAKHLLEDEVPSGMNNGSNVDPKSENESSSEAPEAKSEQNSRFHVNRELIPVAQLSENLVSEELKGLGLDVFNQDEFEQ GVMAQVDDAMAKEEEERKRKQLEKEDMDIKYDIAEKKIITDFLSMYMYAQGSSYSVYDLYWFKVQETATGAENTEDTAAQ GPSSANLEESSTDSQDSTKEPGSSKHHKSHKSKKKDLVSSSSSREESRKKENFFDARDKRHYRNDVEGSYYGDSYRSRQK YKISHNFTEDSPMSDEEACYQDDPDGYLSDEYRPTEKELQEASSDSGLSEVDEPSDNLEPKEKKSKKRKLSLRPKKPPKF VTSDDEGDLSGLPLKRKVSREASVRTKDDGDDDLYELRMSDFNDAEILRDKQIATGEIVDPEDKTFDGGLTVPGRIWSKL FDYQKVGVSWLWELHCQQAGGIIGDEMGLGKTIQMIAFMAALRQSKLRARDFRYKGIGPSLIVCPTTVMQQWDELVRKIV KCNGVLVTSYTTLVLHQDAVLPYNWHYVVLDEGHKIRNPDAQATLVCKQFKTPHRIILSGSPIQNNLKELWSLFDFIFPG KLGTLPDFLAHFSVPIVQGGYANATEIQVQTAYKCACVLRDTINPYLLRRMKADVKINLPSKNEQ |
|