Gene
Gene Model ID | pfu_aug1.0_3044.1_44561 |
---|---|
Locus | scaffold3044.1 : 59904 ... 65785 : - |
To GenomeBrowser | scaffold3044.1:59904..65785 |
Genes list of scaffold | scaffold3044.1 |
Synonym | pfu_aug2.0_220.1_00452 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_3044.1_44561.t1 | 2 | 1 | HSP70 | 152 | 417 | 1.8e-12 | 45.9 | 7.9e-14 | 5.8e-10 | 37.7 |
pfu_aug1.0_3044.1_44561.t1 | 2 | 2 | HSP70 | 475 | 550 | 1.8e-12 | 45.9 | 0.0049 | 37.0 | 2.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_3044.1_44561.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3044.1_44561.t1 atgtccacgttgatggtggcggccattgattttggtactacgttctctggttatgcctttgccttcaaagcagacctgca aaatgacaaactgaagatacaaaccaaccaggcgtggaatggaggtcaacagaaactcatctccctaaagacgccaactt gtcttctgctagaccggaacaggaagttcgtgtcgtttggttacgaggctgagactgagtacacagaaattctactggac gaagataaagatcacaatgatttttattacttcaaccggttcaaaatggaactacacggatcaagggtgatttccactga tatgaaactccgggaggcaggagggaaagaacttcgtgcgatgacggtgttttccgaatctataggggctttgaagaaac acctggatgatttactggacttgaggggtacaacaatagaccccgatgagatagagtgggtgttgacagtaccagccatt tggacggactccgcaaaacaattcatgaggaaagcttgtgtagaggcaggaattaaggaccatctacttcgtatcgccct ggaacctgaagctgcatccatttactgtcagcatctaccgaccgagcgcctcggtggagcagagaagggcttctcggtat ccacggtgggcactcggtacatggtcatagaccttggtggtggaacagcggatattaccgtccatgaaaaactagacagt ggaagactgcgcgagatttacagagcaagcgggggagcgagtggcggaacggctgttgacgaatgctttctcgaactttt ccgtaaattattcggaaacgaagtcatgcagattttaaaagacgaaaaagtagaggcttacactgaccttgttcgggaat ttgaggttacgaagcgaaatgttaagccgaataataatggaaaaatcagcatgatgattccttatataactattgaagag ctatgtcagtctattcatggtaaaggtttgaaggaggttctcgcaaagtcggtgatggcgaaacacgttggagtgacggg gaataaactaagatttgagagtcaagtgatggagggaatttttcgtgcagttacaagtgaaattatagagtacatcacac ttgttctgggtcagccggaagtacaaggcgtagaacgatttctgttggttggcggattttctgaaagtgccatggtccag aatgcaatccgtgacgcgtttcctggaaagcggctgataattcccgatgagcccggactggcagttctaaagggggcggt tctctacggtaacgaaccccagacgatttccgagaggtccatcaagtattcctatggggtaaaaacggcgccagaatttg acgagaagaggcatgaccctaaaaggaaattcgaatctggcgggaagacaaggtgctctagtgtcttcagttcattcatg catgccaacactgtagtcccaatcaacgcggaagtcgtgaaaaaataccaaacaaatgaggcatatcaaaagattctacc gatagaagtattttacagcatatcggacgatccgcgttacacagatgagtcgtgcgtacaaagacttggcatcatggagg tagagatccccaatccgtcaaaggagcgccgtaaagtggaggtgcacttcttctttggtggaacggaaatggaaattgtg gcactggacttggaaacaaacacaccgtgtgaatattctttcaatttgttgtcatga |
Protein
Protein ID | pfu_aug1.0_3044.1_44561.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3044.1_44561.t1 MSTLMVAAIDFGTTFSGYAFAFKADLQNDKLKIQTNQAWNGGQQKLISLKTPTCLLLDRNRKFVSFGYEAETEYTEILLD EDKDHNDFYYFNRFKMELHGSRVISTDMKLREAGGKELRAMTVFSESIGALKKHLDDLLDLRGTTIDPDEIEWVLTVPAI WTDSAKQFMRKACVEAGIKDHLLRIALEPEAASIYCQHLPTERLGGAEKGFSVSTVGTRYMVIDLGGGTADITVHEKLDS GRLREIYRASGGASGGTAVDECFLELFRKLFGNEVMQILKDEKVEAYTDLVREFEVTKRNVKPNNNGKISMMIPYITIEE LCQSIHGKGLKEVLAKSVMAKHVGVTGNKLRFESQVMEGIFRAVTSEIIEYITLVLGQPEVQGVERFLLVGGFSESAMVQ NAIRDAFPGKRLIIPDEPGLAVLKGAVLYGNEPQTISERSIKYSYGVKTAPEFDEKRHDPKRKFESGGKTRCSSVFSSFM HANTVVPINAEVVKKYQTNEAYQKILPIEVFYSISDDPRYTDESCVQRLGIMEVEIPNPSKERRKVEVHFFFGGTEMEIV ALDLETNTPCEYSFNLLS |