Gene
| Gene Model ID | pfu_aug1.0_3050.1_16016 |
|---|---|
| Locus | scaffold3050.1 : 2546 ... 21023 : + |
| To GenomeBrowser | scaffold3050.1:2546..21023 |
| Genes list of scaffold | scaffold3050.1 |
| Synonym | pfu_aug2.0_587.1_24202 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3050.1_16016.t1 | 2 | 1 | PIF1 | 260 | 303 | 1.7e-10 | 40.4 | 0.47 | 390.0 | -0.3 |
| pfu_aug1.0_3050.1_16016.t1 | 2 | 2 | PIF1 | 362 | 491 | 1.7e-10 | 40.4 | 5.3e-13 | 4.4e-10 | 39.0 |
| pfu_aug1.0_3050.1_16016.t1 | 1 | 1 | AAA_30 | 362 | 504 | 1.8e-09 | 37.4 | 3.6e-12 | 3.0e-09 | 36.7 |
| pfu_aug1.0_3050.1_16016.t1 | 1 | 1 | AAA_19 | 387 | 448 | 1.5e-06 | 27.8 | 3.7e-09 | 3.1e-06 | 26.8 |
Transcript
| Transcript ID | pfu_aug1.0_3050.1_16016.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3050.1_16016.t1 atgtacaacgagcatttgctacaagcttggaacgcaaatattgacttgcaatttgtcttagatccatatgcatgtgctat gtacatagtgtcctacatcagcaaatcccaaaggggaatgagtgcattgatggatagagcatgcaaagaagcaaggaatg ggaacatggatataaagaagcaagttcgtcatatcggaaatcattttttgaatagcgtagaagtcagtgcacaggaagca tcttatttgttattacaaatgccccttacaaaaggttcaagggatgttattttcataaatacatcgcctcctcatgaaag ggtagtgctgttgaagcaacaatctgatctcatggaactaagtccagaatccactgacgttcattatcagaatataatct cacgatattccaagagacctaaacagctagaaaactggtgtcttgcagactatgcgtctcaacttgaagtgaagtatcca gatgacaaaaagaaaaatgaaaatgatgaagaggtgaatgacgatgaaccatatccagatcaagatgataattcagaatt ttcagatgaagatactcttgtcactctaagaaatggtatcacaataagaaggcgtatacacgacctcattttacggtatg tgcgctatagcttgaaaactgatccagaaaatcattacagagaaaagttgctattgttcatgccatggcgagatgaaagt cttgatttattgaatggatatgggagttatgaggagcactataaggaaattcattttttagttgaccataaagcaagttt gtacgagaagaatattgaggagatagagcaagctatgcaacaggctgaagaagaatttgcacagcatgatgaaattgctc caaatgcccagcaagcaaatgctgatgatgaagctgaaggtcagcgagaggcgagagaatttgtacatttcaatcctgat agacctcttgagcacaggcgttatgacataggcaatgatatcggtgcttcctcttctgtaccatgcgttgaatttcatgg tgaccgaatatctgatgacgagtacttgaagttagtcagaagtttgaatatcaaacagagagaattctttacacatgttc tgcattggatcaaaactaaagatcagcctctttatgcatttttatcggggggtgctggtgttggaaaatcggtattgatt aaagctatcttccaggctttacatagacagttacactcaatagagggagaagatccagatgacattagaatcttattatg tgcctttactggaaaagcagcatataacatcaatggtgtgactattgcctctgcatttcacaagaaatataaccagagta atcagtcaatgagctctgatgaattgaatacattccgaatgaagtacagaaatctgactgtagtcgtaattgatgaaata tcaatggtgtttgagggcctcaataccacttttacagaactccttatattaactggtcagaaagctatcctctgcaagta tgacgtcattatcggacggaaagtaggtgccggatatagctgctttcagttttgggaaaagaggacggtctcgcggagca agctcaggttggcactaatcggcttccgtaaaaaatcagtacgtgttctagcaaacctgatgagctgtgaaatgtag |
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Protein
| Protein ID | pfu_aug1.0_3050.1_16016.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3050.1_16016.t1 MYNEHLLQAWNANIDLQFVLDPYACAMYIVSYISKSQRGMSALMDRACKEARNGNMDIKKQVRHIGNHFLNSVEVSAQEA SYLLLQMPLTKGSRDVIFINTSPPHERVVLLKQQSDLMELSPESTDVHYQNIISRYSKRPKQLENWCLADYASQLEVKYP DDKKKNENDEEVNDDEPYPDQDDNSEFSDEDTLVTLRNGITIRRRIHDLILRYVRYSLKTDPENHYREKLLLFMPWRDES LDLLNGYGSYEEHYKEIHFLVDHKASLYEKNIEEIEQAMQQAEEEFAQHDEIAPNAQQANADDEAEGQREAREFVHFNPD RPLEHRRYDIGNDIGASSSVPCVEFHGDRISDDEYLKLVRSLNIKQREFFTHVLHWIKTKDQPLYAFLSGGAGVGKSVLI KAIFQALHRQLHSIEGEDPDDIRILLCAFTGKAAYNINGVTIASAFHKKYNQSNQSMSSDELNTFRMKYRNLTVVVIDEI SMVFEGLNTTFTELLILTGQKAILCKYDVIIGRKVGAGYSCFQFWEKRTVSRSKLRLALIGFRKKSVRVLANLMSCEM |
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