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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_3050.1_16017
Locus scaffold3050.1 : 26006 ... 37565 : -
To GenomeBrowser scaffold3050.1:26006..37565
Genes list of scaffold scaffold3050.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_3050.1_16017.t1 1 1 Biopterin_H 22 133 0.0 207.3 0.0 0.0 207.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_3050.1_16017.t1 gi|340369703|ref|XP_003383387.1| PREDICTED: protein henna-like [Amphimedon queenslandica] 0.0

Transcript
Transcript IDpfu_aug1.0_3050.1_16017.t1
Definition-
>pfu_aug1.0_3050.1_16017.t1
atgagagggagcttatgctatcaccctgtcgtcggcgtctgtttccgcgtccgctacggtgtcagtggtactcctattcc
gaaggttgcatatactcttgaagaagttcaaacttggggaacgatttttaaagaattaacgaagttgtatcccactcatg
cttgcaaggaattcaatcacgtgtttccactgttgattgacaactgcggataccgcgaggataatattcctcagctagag
gacatttctaagtttttacgagattgtactggctttcagttacgaccagttgctggtttgctatcatcacgtgacttttt
ggcgggacttgcatttcgagtttttcattccactcaatatataaggcatggatcaaaaccaatgtatacacccgaaccca
tacccatgatgtgctgtttcattctgtcaatttatcgaaaatcagctgagaaaattaaagcagcactcttaaggttcgac
ttctatgcccccttcctcggaaacaggggctga

Protein
Protein IDpfu_aug1.0_3050.1_16017.t1
Definition-
>pfu_aug1.0_3050.1_16017.t1
MRGSLCYHPVVGVCFRVRYGVSGTPIPKVAYTLEEVQTWGTIFKELTKLYPTHACKEFNHVFPLLIDNCGYREDNIPQLE
DISKFLRDCTGFQLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHGSKPMYTPEPIPMMCCFILSIYRKSAEKIKAALLRFD
FYAPFLGNRG

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