Gene
| Gene Model ID | pfu_aug1.0_3058.1_51863 |
|---|---|
| Locus | scaffold3058.1 : 18611 ... 47655 : - |
| To GenomeBrowser | scaffold3058.1:18611..47655 |
| Genes list of scaffold | scaffold3058.1 |
| Synonym | pfu_aug2.0_27.1_23282 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3058.1_51863.t1 | 2 | 1 | Ras | 33 | 86 | 1.1e-29 | 102.9 | 3.6e-11 | 1.8e-07 | 30.6 |
| pfu_aug1.0_3058.1_51863.t1 | 2 | 1 | Miro | 33 | 87 | 4.4e-16 | 59.4 | 5.2e-07 | 0.0026 | 18.2 |
| pfu_aug1.0_3058.1_51863.t1 | 2 | 2 | Ras | 97 | 255 | 1.1e-29 | 102.9 | 2.6e-23 | 1.3e-19 | 70.1 |
| pfu_aug1.0_3058.1_51863.t1 | 2 | 2 | Miro | 97 | 179 | 4.4e-16 | 59.4 | 5.9e-13 | 2.9e-09 | 37.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3058.1_51863.t1 | gi|125987351|ref|XP_001357438.1| | GA18698 [Drosophila pseudoobscura pseudoobscura] | 5.00264e-43 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3058.1_51863.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3058.1_51863.t1 atgagcggcggaggggggctaacagaccagtcagggatacagggtggaacactcaggccttaccttaaaaggaagaaatc gtcatttgctgagaccaaagttgctgttttaggaccgcatggtgtgggcaaaagtgctttgtctgttagattcctcacga aaagattcataggagaatacgaccaaagtgcagaatccaaatacaaatatacaacaaatgttgatggagaaactatgata tttgaagttctcgataccgtttcagaggtaaactcaaaacgtttcgataccgctttaattgttcgtttcatcacacggag attcattggtgaatatgatccagaattagaaaaagtttacacatgcactcgttacctagatggtgataatgttacgttag aggtgctagatactgcagcccaggaagagaaaagcagaattgaggaacacataaaatgggcagacgccttcattctgatg tactcagtaacagactcttgtagttttagtgaggtttgcagactcaaattccttataaacgcttatggcaagcgccaacg aaaacatagtgcttctataccggaaacgaactctacagcgacacctgtggctttagttggtaatcaaattgacagaccac gtgaccgaatggtttcagaagaggatggacgaagaaagtctattgatctcggatgtgttggtttctatgaaatatcagtg agagaatccatagaaaatgtgtgtaaaatatttgaagacatttacgtcatgtgccggaaaccgagaaaatgtcggcaaat atgcaaacagttgtcacttccggcttttatagcagaagacagaactgatgaggacggcaatgaaacttcaagtcttagca gacgacgaaaagctgtgttcacattgtcatag |
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Protein
| Protein ID | pfu_aug1.0_3058.1_51863.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3058.1_51863.t1 MSGGGGLTDQSGIQGGTLRPYLKRKKSSFAETKVAVLGPHGVGKSALSVRFLTKRFIGEYDQSAESKYKYTTNVDGETMI FEVLDTVSEVNSKRFDTALIVRFITRRFIGEYDPELEKVYTCTRYLDGDNVTLEVLDTAAQEEKSRIEEHIKWADAFILM YSVTDSCSFSEVCRLKFLINAYGKRQRKHSASIPETNSTATPVALVGNQIDRPRDRMVSEEDGRRKSIDLGCVGFYEISV RESIENVCKIFEDIYVMCRKPRKCRQICKQLSLPAFIAEDRTDEDGNETSSLSRRRKAVFTLS |
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