Gene
| Gene Model ID | pfu_aug1.0_3058.1_51866 |
|---|---|
| Locus | scaffold3058.1 : 88926 ... 112405 : + |
| To GenomeBrowser | scaffold3058.1:88926..112405 |
| Genes list of scaffold | scaffold3058.1 |
| Synonym | pfu_aug2.0_298.1_27187 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3058.1_51866.t1 | 2 | 1 | ubiquitin | 295 | 305 | 4.0e-07 | 29.3 | 0.3 | 4400.0 | -2.9 |
| pfu_aug1.0_3058.1_51866.t1 | 2 | 2 | ubiquitin | 474 | 531 | 4.0e-07 | 29.3 | 7.3e-11 | 1.1e-06 | 27.9 |
Transcript
| Transcript ID | pfu_aug1.0_3058.1_51866.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3058.1_51866.t1 atgtacatgcttctgatttcgattttcaaagtagaattttacaaattaacagcttttagcataattcggacacatacaag caattcgatatattattggattagaaaacatcttatggagatatcaagaaaagaagtgactgttgaagatttagaaatga tcacttgtactgaagagactgttaaaggggatgactccgacactctgtttttgaaagatataccgttaggacagttctca gatgccggtacacctgtacgtacagatgtatttaacgttcgttttatcttattcaatgctcttgggtgtttggataaaac tgttataggaacatttcaagagcttcagcaagacattgatttcttgaaagatgatccagaagatcttatcaaagcacaag ttgaaaaaacgttcaaaggaatcgtcagagtaggcatgtttggatcggttttaggaattcctccaactattcttaaagca catctactaagaacgtgtaaatggtatgctatcgtatatgatgaagaggaagattgcatatcagcaattctaccaaaaat ggcattaggatcgtctataacagatgcattgtctaagcttaatggtgcttctgaactgaggtatatccgattttcgagaa acggtcacgtagaagatcttctttctgtcatagaagacgagataaacaaggaactggaagttgaaaataagcttcacttg tttcattcttcgaaaaagctttttcctgaaaaatcccttttggacattccttcctcccctgaagttttcctcgttccttt gaaagaaagaaaaaaacatttgaagattttgcactctgttgaccaaaacaaggacgaaatactgcatgtaaactgcttaa cgactgactccgtattagaagtgaggaacaagtttcttcaagatcattttaaaggaaaagaaatcgataaaattgccgta tatttttcaaggcctctgtcaaactctctcctgtccgacgatgatgcagttaacaaagctctgtacacaccgactcagaa aactgtgaaagatttctatccaattgtttccggtagtgaatctgaggacgacgatctgtatagaatagttgatcttgtag ctcatgtaggtgtcaaaggatgtattggtgttacggtgaaatataccaaaacacatcaatttcgaaagtcaaaatttgca ctcattgacaaaaatggttcttcggaatgtctacggcatcaaataggaactgttctacatcaagatcctttgtgtttgaa gttatcaattggaggaaaagatgttccggaaatgatgtcattagctggattaagggaactgaaatatggatgtacaattt ttgtgaaagtcaaacctaaactggatctaagaatagaaggcgacaaacgggtagaaaggatggaagctaaaattatggaa aaagtttgtgacatcaaggaaagagtagctaaatccattcaactccctgttaagatgtttgatatgtctcatgcggggtc attgttgcatgaccattgtacacttaacgatcacaacattgagtcggaaacagtcttgcaaattgtctcgcatgagaaaa gaattgaagtgaatgtaaaaatcatgacaggagacgctgactctctggtctcacttcggaatgtttttcattccggggtt cgcaaccgtttcgatgggaattctctcgattttgctttgccttctcgactttga |
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Protein
| Protein ID | pfu_aug1.0_3058.1_51866.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3058.1_51866.t1 MYMLLISIFKVEFYKLTAFSIIRTHTSNSIYYWIRKHLMEISRKEVTVEDLEMITCTEETVKGDDSDTLFLKDIPLGQFS DAGTPVRTDVFNVRFILFNALGCLDKTVIGTFQELQQDIDFLKDDPEDLIKAQVEKTFKGIVRVGMFGSVLGIPPTILKA HLLRTCKWYAIVYDEEEDCISAILPKMALGSSITDALSKLNGASELRYIRFSRNGHVEDLLSVIEDEINKELEVENKLHL FHSSKKLFPEKSLLDIPSSPEVFLVPLKERKKHLKILHSVDQNKDEILHVNCLTTDSVLEVRNKFLQDHFKGKEIDKIAV YFSRPLSNSLLSDDDAVNKALYTPTQKTVKDFYPIVSGSESEDDDLYRIVDLVAHVGVKGCIGVTVKYTKTHQFRKSKFA LIDKNGSSECLRHQIGTVLHQDPLCLKLSIGGKDVPEMMSLAGLRELKYGCTIFVKVKPKLDLRIEGDKRVERMEAKIME KVCDIKERVAKSIQLPVKMFDMSHAGSLLHDHCTLNDHNIESETVLQIVSHEKRIEVNVKIMTGDADSLVSLRNVFHSGV RNRFDGNSLDFALPSRL |
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