Gene
| Gene Model ID | pfu_aug1.0_30662.1_47988 |
|---|---|
| Locus | scaffold30662.1 : 9 ... 7075 : - |
| To GenomeBrowser | scaffold30662.1:9..7075 |
| Genes list of scaffold | scaffold30662.1 |
| Synonym | pfu_aug2.0_7762.1_09630 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_30662.1_47988.t1 | 3 | 1 | EF-hand_1 | 25 | 53 | 4.4e-23 | 78.7 | 5.2e-12 | 9.7e-09 | 33.9 |
| pfu_aug1.0_30662.1_47988.t1 | 3 | 1 | EF-hand_6 | 25 | 54 | 1.3e-19 | 68.1 | 1.2e-11 | 2.2e-08 | 33.3 |
| pfu_aug1.0_30662.1_47988.t1 | 3 | 1 | EF-hand_8 | 25 | 52 | 4.8e-14 | 51.6 | 3.1e-06 | 0.0058 | 16.2 |
| pfu_aug1.0_30662.1_47988.t1 | 2 | 1 | EF-hand_7 | 26 | 86 | 1.7e-19 | 69.7 | 3.5e-17 | 6.6e-14 | 51.8 |
| pfu_aug1.0_30662.1_47988.t1 | 3 | 1 | EF-hand_5 | 26 | 49 | 4.2e-15 | 54.2 | 2.3e-08 | 4.3e-05 | 22.6 |
| pfu_aug1.0_30662.1_47988.t1 | 2 | 1 | EF-hand_9 | 28 | 89 | 6.9e-08 | 32.2 | 2.3e-09 | 4.3e-06 | 26.5 |
| pfu_aug1.0_30662.1_47988.t1 | 3 | 2 | EF-hand_8 | 49 | 88 | 4.8e-14 | 51.6 | 2.5e-09 | 4.7e-06 | 26.1 |
| pfu_aug1.0_30662.1_47988.t1 | 3 | 2 | EF-hand_1 | 61 | 87 | 4.4e-23 | 78.7 | 1.1e-09 | 2.0e-06 | 26.6 |
| pfu_aug1.0_30662.1_47988.t1 | 3 | 2 | EF-hand_6 | 70 | 87 | 1.3e-19 | 68.1 | 2.2e-05 | 0.041 | 13.7 |
| pfu_aug1.0_30662.1_47988.t1 | 3 | 2 | EF-hand_5 | 70 | 82 | 4.2e-15 | 54.2 | 5.0e-05 | 0.093 | 12.1 |
| pfu_aug1.0_30662.1_47988.t1 | 3 | 3 | EF-hand_1 | 99 | 122 | 4.4e-23 | 78.7 | 2.0e-08 | 3.6e-05 | 22.7 |
| pfu_aug1.0_30662.1_47988.t1 | 3 | 3 | EF-hand_6 | 99 | 122 | 1.3e-19 | 68.1 | 1.2e-07 | 0.00022 | 20.8 |
| pfu_aug1.0_30662.1_47988.t1 | 2 | 2 | EF-hand_7 | 100 | 122 | 1.7e-19 | 69.7 | 3.9e-06 | 0.0071 | 16.4 |
| pfu_aug1.0_30662.1_47988.t1 | 3 | 3 | EF-hand_5 | 102 | 122 | 4.2e-15 | 54.2 | 2.9e-07 | 0.00053 | 19.2 |
| pfu_aug1.0_30662.1_47988.t1 | 3 | 3 | EF-hand_8 | 102 | 119 | 4.8e-14 | 51.6 | 3.1e-05 | 0.057 | 13.0 |
| pfu_aug1.0_30662.1_47988.t1 | 2 | 2 | EF-hand_9 | 103 | 120 | 6.9e-08 | 32.2 | 0.029 | 54.0 | 3.7 |
Transcript
| Transcript ID | pfu_aug1.0_30662.1_47988.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_30662.1_47988.t1 atgcacaggatccctccggcgagcaagcacttctttcgcaagcccaacatttaaataattgattatattgcagaaattaa agcggcctttgatttctttgacaaagatgggaatggagctattgatgtgaatgaactcggtaatatgatgagaagtcttg ggcagaatccgacagaggcagaacttaaggatatgatagcaaatcaagatgtaaacagaaatggtactattgattacgat gaattcattatcatgatggaagaaaattacaaagacataagtaccgtagaagctgaacttttggcggcctttagagtgtt cgatatggaccacaatggatatatagaaagctcggagctcaggaaangagaaatatatttaaaccagaaattcgaaatcc gaaagcagaaatga |
|
Protein
| Protein ID | pfu_aug1.0_30662.1_47988.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_30662.1_47988.t1 MHRIPPASKHFFRKPNIXIIDYIAEIKAAFDFFDKDGNGAIDVNELGNMMRSLGQNPTEAELKDMIANQDVNRNGTIDYD EFIIMMEENYKDISTVEAELLAAFRVFDMDHNGYIESSELRKXEIYLNQKFEIRKQK |
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