Gene
| Gene Model ID | pfu_aug1.0_3068.1_23154 |
|---|---|
| Locus | scaffold3068.1 : 22266 ... 30035 : + |
| To GenomeBrowser | scaffold3068.1:22266..30035 |
| Genes list of scaffold | scaffold3068.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3068.1_23154.t1 | 4 | 1 | LRR_8 | 31 | 51 | 1.0e-18 | 66.8 | 0.0023 | 5.7 | 6.7 |
| pfu_aug1.0_3068.1_23154.t1 | 8 | 1 | LRR_1 | 31 | 47 | 2.3e-14 | 51.1 | 0.05 | 120.0 | 3.3 |
| pfu_aug1.0_3068.1_23154.t1 | 4 | 2 | LRR_8 | 32 | 72 | 1.0e-18 | 66.8 | 1.2e-06 | 0.0028 | 17.3 |
| pfu_aug1.0_3068.1_23154.t1 | 5 | 1 | LRR_4 | 32 | 44 | 2.8e-12 | 45.9 | 0.35 | 870.0 | -0.3 |
| pfu_aug1.0_3068.1_23154.t1 | 2 | 1 | LRR_5 | 32 | 72 | 3.1e-06 | 26.9 | 0.0011 | 2.8 | 7.6 |
| pfu_aug1.0_3068.1_23154.t1 | 2 | 2 | LRR_5 | 40 | 160 | 3.1e-06 | 26.9 | 2.4e-08 | 5.8e-05 | 22.7 |
| pfu_aug1.0_3068.1_23154.t1 | 4 | 3 | LRR_8 | 56 | 117 | 1.0e-18 | 66.8 | 1.7e-12 | 4.2e-09 | 36.0 |
| pfu_aug1.0_3068.1_23154.t1 | 8 | 2 | LRR_1 | 56 | 72 | 2.3e-14 | 51.1 | 0.00069 | 1.7 | 8.9 |
| pfu_aug1.0_3068.1_23154.t1 | 5 | 2 | LRR_4 | 56 | 97 | 2.8e-12 | 45.9 | 9.7e-07 | 0.0024 | 17.4 |
| pfu_aug1.0_3068.1_23154.t1 | 8 | 3 | LRR_1 | 83 | 102 | 2.3e-14 | 51.1 | 3.4e-05 | 0.084 | 12.9 |
| pfu_aug1.0_3068.1_23154.t1 | 5 | 3 | LRR_4 | 85 | 120 | 2.8e-12 | 45.9 | 3.0e-08 | 7.4e-05 | 22.2 |
| pfu_aug1.0_3068.1_23154.t1 | 8 | 4 | LRR_1 | 106 | 122 | 2.3e-14 | 51.1 | 8.3e-05 | 0.21 | 11.7 |
| pfu_aug1.0_3068.1_23154.t1 | 4 | 4 | LRR_8 | 126 | 184 | 1.0e-18 | 66.8 | 5.4e-09 | 1.3e-05 | 24.7 |
| pfu_aug1.0_3068.1_23154.t1 | 8 | 5 | LRR_1 | 126 | 144 | 2.3e-14 | 51.1 | 0.0016 | 3.9 | 7.8 |
| pfu_aug1.0_3068.1_23154.t1 | 5 | 4 | LRR_4 | 126 | 166 | 2.8e-12 | 45.9 | 3.5e-07 | 0.00087 | 18.8 |
| pfu_aug1.0_3068.1_23154.t1 | 8 | 6 | LRR_1 | 150 | 175 | 2.3e-14 | 51.1 | 0.00033 | 0.82 | 9.9 |
| pfu_aug1.0_3068.1_23154.t1 | 5 | 5 | LRR_4 | 150 | 184 | 2.8e-12 | 45.9 | 1.0e-05 | 0.025 | 14.1 |
| pfu_aug1.0_3068.1_23154.t1 | 8 | 7 | LRR_1 | 173 | 187 | 2.3e-14 | 51.1 | 0.037 | 92.0 | 3.7 |
| pfu_aug1.0_3068.1_23154.t1 | 8 | 8 | LRR_1 | 206 | 221 | 2.3e-14 | 51.1 | 0.16 | 390.0 | 1.7 |
Transcript
| Transcript ID | pfu_aug1.0_3068.1_23154.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3068.1_23154.t1 atgaaaatggatggaatatggacatggaaattactttgttttctaacttgctcaacgttagcgtttgccttgtgcccaaa taatagtggagtaattgatctgtcacaccaaggtctgaccagtataaacgccagtgtctttgtggactgtccagcagatg cccatactctgatattgtccggtaataacataacaaggattcacaacgattcgtttctggaggggcaaactgtaaaattc tatcaactgttatcccttgatttgagtaataaccatatagaacatattgatgatactgcctttggactcctccgccgtct tgaaatcctgaatctgagtggtaactccttaaccatgctggacaacaagttctaccttagagctgttgacttttcttaca acaacatttctgatataggcgaccaagtgtttacttctcaacacaacaacctgcgctatgtgaatatttctcacaacagt atgtcgtttatggagccatggccctacattccaccaaatcttcttcaattcaatctttctcacaacaagatcttcacttt caccaataggatgaactggaggtacgatcttagtgaaccttatcatgccaacaccgacctcagatacaatcagttagtcc actggaatgacagttacttcaagcaatataacacggaacctgacgccgactgcgctactgactttgttacgtatcagatg gacatgagagataatccttggttttgcgattgcaatgtacattacttttcaaaacgttatcaaaactcgttctacaaaca cgcagacacttaa |
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Protein
| Protein ID | pfu_aug1.0_3068.1_23154.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3068.1_23154.t1 MKMDGIWTWKLLCFLTCSTLAFALCPNNSGVIDLSHQGLTSINASVFVDCPADAHTLILSGNNITRIHNDSFLEGQTVKF YQLLSLDLSNNHIEHIDDTAFGLLRRLEILNLSGNSLTMLDNKFYLRAVDFSYNNISDIGDQVFTSQHNNLRYVNISHNS MSFMEPWPYIPPNLLQFNLSHNKIFTFTNRMNWRYDLSEPYHANTDLRYNQLVHWNDSYFKQYNTEPDADCATDFVTYQM DMRDNPWFCDCNVHYFSKRYQNSFYKHADT |
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