Gene
| Gene Model ID | pfu_aug1.0_3068.1_23156 |
|---|---|
| Locus | scaffold3068.1 : 42866 ... 48073 : + |
| To GenomeBrowser | scaffold3068.1:42866..48073 |
| Genes list of scaffold | scaffold3068.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3068.1_23156.t1 | 3 | 1 | LRR_8 | 13 | 71 | 4.5e-12 | 45.5 | 1.9e-08 | 4.0e-05 | 23.2 |
| pfu_aug1.0_3068.1_23156.t1 | 4 | 1 | LRR_4 | 13 | 53 | 2.4e-09 | 36.6 | 7.1e-06 | 0.015 | 14.9 |
| pfu_aug1.0_3068.1_23156.t1 | 6 | 1 | LRR_1 | 13 | 32 | 2.6e-07 | 29.7 | 0.013 | 29.0 | 5.2 |
| pfu_aug1.0_3068.1_23156.t1 | 4 | 2 | LRR_4 | 37 | 71 | 2.4e-09 | 36.6 | 3.6e-05 | 0.077 | 12.6 |
| pfu_aug1.0_3068.1_23156.t1 | 6 | 2 | LRR_1 | 37 | 62 | 2.6e-07 | 29.7 | 0.00088 | 1.9 | 8.8 |
| pfu_aug1.0_3068.1_23156.t1 | 6 | 3 | LRR_1 | 60 | 74 | 2.6e-07 | 29.7 | 0.1 | 220.0 | 2.5 |
| pfu_aug1.0_3068.1_23156.t1 | 6 | 4 | LRR_1 | 93 | 108 | 2.6e-07 | 29.7 | 0.7 | 1500.0 | 0.0 |
| pfu_aug1.0_3068.1_23156.t1 | 3 | 2 | LRR_8 | 212 | 244 | 4.5e-12 | 45.5 | 0.0026 | 5.5 | 6.8 |
| pfu_aug1.0_3068.1_23156.t1 | 6 | 5 | LRR_1 | 231 | 242 | 2.6e-07 | 29.7 | 0.042 | 89.0 | 3.7 |
| pfu_aug1.0_3068.1_23156.t1 | 4 | 3 | LRR_4 | 232 | 241 | 2.4e-09 | 36.6 | 0.088 | 190.0 | 1.8 |
| pfu_aug1.0_3068.1_23156.t1 | 3 | 3 | LRR_8 | 253 | 291 | 4.5e-12 | 45.5 | 6.2e-06 | 0.013 | 15.2 |
| pfu_aug1.0_3068.1_23156.t1 | 4 | 4 | LRR_4 | 275 | 309 | 2.4e-09 | 36.6 | 4.0e-05 | 0.084 | 12.5 |
| pfu_aug1.0_3068.1_23156.t1 | 6 | 6 | LRR_1 | 276 | 293 | 2.6e-07 | 29.7 | 0.00047 | 0.99 | 9.6 |
| pfu_aug1.0_3068.1_23156.t1 | 1 | 1 | TIR | 417 | 552 | 3.2e-21 | 75.2 | 2.6e-24 | 5.6e-21 | 74.4 |
| pfu_aug1.0_3068.1_23156.t1 | 1 | 1 | TIR_2 | 417 | 513 | 7.1e-11 | 42.1 | 8.6e-14 | 1.8e-10 | 40.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3068.1_23156.t1 | gi|194745081|ref|XP_001955021.1| | GF16456 [Drosophila ananassae] | 2.0e-31 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3068.1_23156.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3068.1_23156.t1 atgctacaatcactactactggacaacaagttctaccttagagctgttgacttttcttacaacgacatttctgatatagg cgatgaagtgtttacttctcaacacaacaacctgcgctatgtgaatatttctcacaacagtatgtcgtttatggagccat ggccctacattccgccgaatcttcttcaattcaatctttctcacaacaagatcttcactttcaccaataggatgaactgg aggtacgatcttagtgaaccttaccatgccaacaccgacctcagattcaatcagttagtccactggaacgacagttactt caagcaatataacacggaacctgacgctgacttcgctactgactttgttacgtatcagatggacatgagagataatcctt ggttttgcgattgcaatgtacattacttttcaaaacgctatcaaaactcgttctacaaacacgcagacactaaattgttg gaggtaaaatgtgaaggtccaccagagcttaaaggcaaagccatatttaatgacgtaggtttggacgagttgatctgcaa tctgaccattgactgtccaaatggatgtttgtgtcaggaccaaccggaaaataacatcctaaaagtaaactgtaccaata caaatatgactgtcatgccagacaagctaccaagtaacccatataataggacagaacttaaccttgaccacaactctatc caagtgttcgaaatgcggccctacacttcaagtataatcagcctgtctatggaacggaacagattaataaggatggatga tggagccgttagagaaatgaaggaattacaagagatgaacatcgagaacaatcaattgcaggaactcccaaaaagtatcc agtatagcgctaggtttgagattgtagatctgaaaaggaatccttttgtgtgtagctgtacaatggtctggatgagggac tggatcaaccttgcacccgaagatgatgaagatcgagatgtaacgtgtcgaaacgacgataaggatgtcaaaatcacaga cgttactgaatccttcctaaattgtaactatgacgtagaaattggacttgccatcggttttggcatcctgttggtcatcg tcatcatcatagtaatttgggccaagagatgtccttacgaaacaaaggttctcgtctataaattcttaaggattcatccg caggacaagtacaaagtggatgaccaagacacgacagagcatgatctgtacgtatcttttgacgatgaagacattcatat ccgacagtgggttctgaggaaactagccaagaggctggaggaagagaagcccaagtatagagtatttgtgcccgtaaggg atcttttgggtggaggtgaaaaagcagacggaattatacacaatatggaaaaaagcagaagagtattaatcatattgtca cataaatatgacgataatgaatggtgtcgatttgagtgtcagcgcgcagagattttagaacataatgacggtagagtgat tttcattaagtatcatcccgaagcggagaaaatgatagaaactgaaccatggaagtcaagggtcaaaggcaggaaagtat tttcacctggcgaaaaaagaagcgaaagaagatggttttgggataaacttaaatatgaattacccgtgcgatga |
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Protein
| Protein ID | pfu_aug1.0_3068.1_23156.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3068.1_23156.t1 MLQSLLLDNKFYLRAVDFSYNDISDIGDEVFTSQHNNLRYVNISHNSMSFMEPWPYIPPNLLQFNLSHNKIFTFTNRMNW RYDLSEPYHANTDLRFNQLVHWNDSYFKQYNTEPDADFATDFVTYQMDMRDNPWFCDCNVHYFSKRYQNSFYKHADTKLL EVKCEGPPELKGKAIFNDVGLDELICNLTIDCPNGCLCQDQPENNILKVNCTNTNMTVMPDKLPSNPYNRTELNLDHNSI QVFEMRPYTSSIISLSMERNRLIRMDDGAVREMKELQEMNIENNQLQELPKSIQYSARFEIVDLKRNPFVCSCTMVWMRD WINLAPEDDEDRDVTCRNDDKDVKITDVTESFLNCNYDVEIGLAIGFGILLVIVIIIVIWAKRCPYETKVLVYKFLRIHP QDKYKVDDQDTTEHDLYVSFDDEDIHIRQWVLRKLAKRLEEEKPKYRVFVPVRDLLGGGEKADGIIHNMEKSRRVLIILS HKYDDNEWCRFECQRAEILEHNDGRVIFIKYHPEAEKMIETEPWKSRVKGRKVFSPGEKRSERRWFWDKLKYELPVR |
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