Gene
Gene Model ID | pfu_aug1.0_307148.1_36000 |
---|---|
Locus | scaffold307148.1 : 1 ... 475 : - |
To GenomeBrowser | scaffold307148.1:1..475 |
Genes list of scaffold | scaffold307148.1 |
Synonym | NA |
Manual annotation
Study field | other developmental genes |
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Gene name | engrailed |
Description | The best hit to J03066.1 Homo sapiens homeobox protein En-2 gene, partial cds |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_307148.1_36000.t1 | 1 | 1 | Homeobox | 2 | 44 | 8.6e-17 | 60.5 | 4.5e-20 | 1.1e-16 | 60.1 |
pfu_aug1.0_307148.1_36000.t1 | 1 | 1 | Engrail_1_C_sig | 45 | 76 | 7.3e-16 | 56.9 | 4.9e-19 | 1.2e-15 | 56.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_307148.1_36000.t1 | gi|1170318|sp|P09075.3|HME60_APIME | Homeobox protein E60 | 5.0e-25 |
Transcript
Transcript ID | pfu_aug1.0_307148.1_36000.t1 |
---|---|
Definition | - |
>pfu_aug1.0_307148.1_36000.t1 atgttgaaaaaagagttcgaaacttgtcgatatctcactgaacaaagacgaaatcaactctcgcgagacttagatttgtc tgaatctcagatcaagatttggttccaaaataaacgtgctaaaatcaagaaagccagcggtaacaaaaacgccctggccc tcactctaatggctcatggactctataaccactcaaccgtgtcgttacactcggatgaagacgatgaaagggtctcgaaa tga |
Protein
Protein ID | pfu_aug1.0_307148.1_36000.t1 |
---|---|
Definition | - |
>pfu_aug1.0_307148.1_36000.t1 MLKKEFETCRYLTEQRRNQLSRDLDLSESQIKIWFQNKRAKIKKASGNKNALALTLMAHGLYNHSTVSLHSDEDDERVSK |