Gene
| Gene Model ID | pfu_aug1.0_307148.1_36000 |
|---|---|
| Locus | scaffold307148.1 : 1 ... 475 : - |
| To GenomeBrowser | scaffold307148.1:1..475 |
| Genes list of scaffold | scaffold307148.1 |
| Synonym | NA |
Manual annotation
| Study field | other developmental genes |
|---|---|
| Gene name | engrailed |
| Description | The best hit to J03066.1 Homo sapiens homeobox protein En-2 gene, partial cds |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_307148.1_36000.t1 | 1 | 1 | Homeobox | 2 | 44 | 8.6e-17 | 60.5 | 4.5e-20 | 1.1e-16 | 60.1 |
| pfu_aug1.0_307148.1_36000.t1 | 1 | 1 | Engrail_1_C_sig | 45 | 76 | 7.3e-16 | 56.9 | 4.9e-19 | 1.2e-15 | 56.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_307148.1_36000.t1 | gi|1170318|sp|P09075.3|HME60_APIME | Homeobox protein E60 | 5.0e-25 |
Transcript
| Transcript ID | pfu_aug1.0_307148.1_36000.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_307148.1_36000.t1 atgttgaaaaaagagttcgaaacttgtcgatatctcactgaacaaagacgaaatcaactctcgcgagacttagatttgtc tgaatctcagatcaagatttggttccaaaataaacgtgctaaaatcaagaaagccagcggtaacaaaaacgccctggccc tcactctaatggctcatggactctataaccactcaaccgtgtcgttacactcggatgaagacgatgaaagggtctcgaaa tga |
|
Protein
| Protein ID | pfu_aug1.0_307148.1_36000.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_307148.1_36000.t1 MLKKEFETCRYLTEQRRNQLSRDLDLSESQIKIWFQNKRAKIKKASGNKNALALTLMAHGLYNHSTVSLHSDEDDERVSK |
|