Gene
| Gene Model ID | pfu_aug1.0_308.1_29184 |
|---|---|
| Locus | scaffold308.1 : 19516 ... 27305 : + |
| To GenomeBrowser | scaffold308.1:19516..27305 |
| Genes list of scaffold | scaffold308.1 |
| Synonym | pfu_aug2.0_1666.1_21734 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_308.1_29184.t1 | 4 | 1 | Sushi | 7 | 43 | 1.7e-31 | 108.3 | 3.7e-12 | 2.7e-08 | 34.0 |
| pfu_aug1.0_308.1_29184.t1 | 4 | 2 | Sushi | 62 | 103 | 1.7e-31 | 108.3 | 1.9e-10 | 1.4e-06 | 28.4 |
| pfu_aug1.0_308.1_29184.t1 | 4 | 3 | Sushi | 124 | 161 | 1.7e-31 | 108.3 | 8.4e-10 | 6.3e-06 | 26.4 |
| pfu_aug1.0_308.1_29184.t1 | 4 | 4 | Sushi | 166 | 223 | 1.7e-31 | 108.3 | 8.1e-11 | 6.0e-07 | 29.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_308.1_29184.t1 | gi|242009433|ref|XP_002425490.1| | c4b-binding protein beta chain, putative [Pediculus humanus corporis] | 4.0e-31 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_308.1_29184.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_308.1_29184.t1 atgataggagtaggcaatgcttttggtacagtgatccagttcaaatgtaaaggaaacttccatttgagtggctctgagga gcgcaggtgtcaggcaaacagaacctggagtggaacggcggcaacatgcagtgcagaaattaagtgtgaatggccgaata aattttggaatggttacgttctcggagagaaaacacacgtgggatctacagtatttttcagctgtcgtgtacgtactaag tttgttggagattactttgatgcaacatgtttgccaaatggcacgtggtcacacccacaaccaacatgctggggacaatg tcaagttccatcaattgagaaggctatattagaaggtgtacgccagggaacctggagggaccacggcacgggcctgagat atcagtgtgtagatggctttgttccccagacctccaaacaacttatgtgtaataatggtacctggtctgacctgcctcag tgtgtaccagctccctgtcgagatatccctcctcccatcaacaacggcctgaggatatacactggtcggcaaaatggtag aaaagcaaagtacatatgtctgaatgggtatcgcctagccgggatggacgtagataatgctaccctgatctgccagcagg gtacttggataggaggagcaccgagatgtgaacaaggtgatcagatcctagtcttttctgatgagattatgatagtgact gtcatagcgtcctattgtaaaggggtcagcgtacaatgcttggaaagatgccgatacaaaaatgttgaaggttaa |
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Protein
| Protein ID | pfu_aug1.0_308.1_29184.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_308.1_29184.t1 MIGVGNAFGTVIQFKCKGNFHLSGSEERRCQANRTWSGTAATCSAEIKCEWPNKFWNGYVLGEKTHVGSTVFFSCRVRTK FVGDYFDATCLPNGTWSHPQPTCWGQCQVPSIEKAILEGVRQGTWRDHGTGLRYQCVDGFVPQTSKQLMCNNGTWSDLPQ CVPAPCRDIPPPINNGLRIYTGRQNGRKAKYICLNGYRLAGMDVDNATLICQQGTWIGGAPRCEQGDQILVFSDEIMIVT VIASYCKGVSVQCLERCRYKNVEG |
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