Gene
| Gene Model ID | pfu_aug1.0_30871.1_69989 |
|---|---|
| Locus | scaffold30871.1 : 2 ... 7037 : + |
| To GenomeBrowser | scaffold30871.1:2..7037 |
| Genes list of scaffold | scaffold30871.1 |
| Synonym | pfu_aug2.0_3521.1_05845 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_30871.1_69989.t1 | 3 | 1 | IBR | 197 | 210 | 6.8e-11 | 41.8 | 1.0 | 15000.0 | -8.5 |
| pfu_aug1.0_30871.1_69989.t1 | 3 | 2 | IBR | 250 | 318 | 6.8e-11 | 41.8 | 2.5e-10 | 3.7e-06 | 26.7 |
| pfu_aug1.0_30871.1_69989.t1 | 3 | 3 | IBR | 338 | 378 | 6.8e-11 | 41.8 | 2.8e-11 | 4.1e-07 | 29.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_30871.1_69989.t1 | gi|334324160|ref|XP_001380082.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_30871.1_69989.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_30871.1_69989.t1 atggcggaagaagcaagtagaagtgatatttcatcagaggaaaaaggtttacccattgacagtcataaagtcaatgccgt gactgacatcaaagactctcacagaagaaatttgtcattgaaatttccgagaaaattagaaccaatgcatgtactcgggt caggtgaggatggatatgtacagaatctatcacttcaagccataaaaagtgaaaaatctaagagaaacagctccaggaag aattctaaatgtagaaaacagaaaaaatctcccattgtgttacaggtaccagaaacagactctgatgattcaagccaatc ttcagtttcagacgtagatgaaacgactggaggaatttcaacatatgatataagtgatgaggaagatttcagttggtaca tggaggatttgatggatgcaaacattcctggaatggaggaattggctttcggaggatatgaggatggtgaaccagatgaa cctgttgaagaaccaaagaaggagattatttatccatacggtaaccttgtaccaggagagagagaatgtgaaatatgtct agagacagacgttggtagacggtacagaaaatgctgccgtatctgtgtttgcgatgaatgtatgaacgcatactttgcct gtcaggttgaaaacggaatagtaaggataggctgtgtaagcgatcgatgtgatcaacatgctcatgttgaggagataatg tgtcgactgcctgcatgtttgaaaaataagtactacaaattcctggtagatgccaacaatgacccctatgtcaaaacttg tccgaggtgtaactacatacatcatgtcaacaaagaagatatgaatgctcagagtaaacagttgaaaaagtatggatatt cagtgtgttgtccagactgtaaacttgtttggtgtttcccctgtcatgctccagagcataaggaaatcaagtgtaaggaa ttccgtaaaggagataagcttgtgaagacgtgggctaaggagagaaaatacggacagaaaaatgctgaaaaatgccctaa atgcaaggtctacattgaaagaaatggtggatgtgatcacatgacctgtgagaaatgctacaccagtttttgttactgtt gcggagaacgttttattcacctacggtttattggggaccattttggaaagtacagtcccttcggctgtaaatataaactc ctgccagatagaccagttctcagaaggacaatcagaggttcaattctagccaatcaaaatttgcctgacttgattggaca agttggaaaacctgtaatcagactgagtgatagtgaaatgacctctagtcaatccagtactgattcatccttgacctctg acccaagtcatgaagacgaagtactaaatgtcagagttgaaggtcacagtggagggtcagaaaacgtctcagtgtggatt cattctcagcacaaggagaaaaagaagctgcctagtcaaaaatcaaaagatgatgctgtgacatcattagaggtcaagga caaagaggacaaggagattgtgatatctgactgtgataaagacgttcaaaccactgccaagatatctaaaactgccactg attctgatgctatagttcttcatgttaaaaccaccagtaaaagttccaaaaaagatccaaaagttgttccacgtgaagtt gtgactaattctgaagctgatgcatctaacagtccagattttgtcacaggtgcttctgaaaataaaaaatcaacgaatgg atgttttgtcgctttgtttggaagaaaactcccaactttgtcggaaaatgatgcaggacataaccactccacttcagaag aatcaaatgcacttcaaacaaactctagaaattctgatgcggacggccaactagaaagtaggacagataaatataaggct attcctgatgttctcaaatcgtcactggaggctgatcaaccacccatagttgacgctgaatactttcctcaatcagagga tgaagtatccactgagggtaacgtagatgcatattatggagtaattgctgaagagagtatagaaacatcgttatga |
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Protein
| Protein ID | pfu_aug1.0_30871.1_69989.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_30871.1_69989.t1 MAEEASRSDISSEEKGLPIDSHKVNAVTDIKDSHRRNLSLKFPRKLEPMHVLGSGEDGYVQNLSLQAIKSEKSKRNSSRK NSKCRKQKKSPIVLQVPETDSDDSSQSSVSDVDETTGGISTYDISDEEDFSWYMEDLMDANIPGMEELAFGGYEDGEPDE PVEEPKKEIIYPYGNLVPGERECEICLETDVGRRYRKCCRICVCDECMNAYFACQVENGIVRIGCVSDRCDQHAHVEEIM CRLPACLKNKYYKFLVDANNDPYVKTCPRCNYIHHVNKEDMNAQSKQLKKYGYSVCCPDCKLVWCFPCHAPEHKEIKCKE FRKGDKLVKTWAKERKYGQKNAEKCPKCKVYIERNGGCDHMTCEKCYTSFCYCCGERFIHLRFIGDHFGKYSPFGCKYKL LPDRPVLRRTIRGSILANQNLPDLIGQVGKPVIRLSDSEMTSSQSSTDSSLTSDPSHEDEVLNVRVEGHSGGSENVSVWI HSQHKEKKKLPSQKSKDDAVTSLEVKDKEDKEIVISDCDKDVQTTAKISKTATDSDAIVLHVKTTSKSSKKDPKVVPREV VTNSEADASNSPDFVTGASENKKSTNGCFVALFGRKLPTLSENDAGHNHSTSEESNALQTNSRNSDADGQLESRTDKYKA IPDVLKSSLEADQPPIVDAEYFPQSEDEVSTEGNVDAYYGVIAEESIETSL |
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