Gene
| Gene Model ID | pfu_aug1.0_3089.1_23170 |
|---|---|
| Locus | scaffold3089.1 : 3806 ... 13472 : + |
| To GenomeBrowser | scaffold3089.1:3806..13472 |
| Genes list of scaffold | scaffold3089.1 |
| Synonym | pfu_aug2.0_15.1_16704 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3089.1_23170.t1 | 2 | 1 | WD40 | 48 | 74 | 4.1e-14 | 51.8 | 1.0e-11 | 3.9e-08 | 32.8 |
| pfu_aug1.0_3089.1_23170.t1 | 2 | 2 | WD40 | 78 | 100 | 4.1e-14 | 51.8 | 4.0e-08 | 0.00015 | 21.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3089.1_23170.t1 | gi|241604625|ref|XP_002405923.1| | THO complex subunit, putative [Ixodes scapularis] | 7.0e-21 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_3089.1_23170.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3089.1_23170.t1 atgagtacagagggtggaaagatgccggagcctactgacatcaagcctcctgtctccaccaccaccagtgccccgccagc cacccaggctgccacacccactactgcagccccacctgttaaatcccagtcacaatcaatgggaatctcagatatagcct ggtccactgacagtcgtcttctggtcagtgcatctgatgacaaaacactcaaaatctgggactttgccacggtacatttc aacagagatggatccttgattgtctccagtagttatgatggtttatgtcgaatatgggatacagcatcaggtcaatgttt aaagacgttgatagaaattattaatgaaatgaagtcatttgtcaggggttgcggaagtgtcatttacctcatttctcacg acattgaattttattataccccatataatggatatggcaaattaagaggtgtgattggtcgagagaggtaa |
|
Protein
| Protein ID | pfu_aug1.0_3089.1_23170.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3089.1_23170.t1 MSTEGGKMPEPTDIKPPVSTTTSAPPATQAATPTTAAPPVKSQSQSMGISDIAWSTDSRLLVSASDDKTLKIWDFATVHF NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIEIINEMKSFVRGCGSVIYLISHDIEFYYTPYNGYGKLRGVIGRER |
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