Gene
| Gene Model ID | pfu_aug1.0_3089.1_23172 |
|---|---|
| Locus | scaffold3089.1 : 23416 ... 34130 : + |
| To GenomeBrowser | scaffold3089.1:23416..34130 |
| Genes list of scaffold | scaffold3089.1 |
| Synonym | pfu_aug2.0_15.1_16706 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3089.1_23172.t1 | 1 | 1 | OST3_OST6 | 7 | 137 | 4.6e-38 | 130.2 | 8.09951e-42 | 6.0e-38 | 129.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3089.1_23172.t1 | gi|291223634|ref|XP_002731813.1| | PREDICTED: oligosaccharyltransferase complex subunit ostc-B-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3089.1_23172.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3089.1_23172.t1 atggaagctttgtacagtttacctttcacggtgttagaggtcccaaacctgaaattaagaaagccaggatgggtcaaaca gccgtcagctatgttcatgttttccatggtccttctgtcgtacttcttggttacgggaggaatcatatatgatgtcattg ttgagcctccaagcattggttccacaacagacgaaaaaggcaattctaaaccggtggccttcatgccatacagagtaaat ggtcagtacattatggaaggcttagcttctagtttcctttttacaatgggaggtctaggatttgtgattctggatcaagt caataagaccatgccacgtttaaatcgcatcttactactgtgtatgggatttgcagcaatactgatttccttctttatgt gtcgagtatttatgagaatgaaattaccgggctatctgatgagctga |
|
Protein
| Protein ID | pfu_aug1.0_3089.1_23172.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3089.1_23172.t1 MEALYSLPFTVLEVPNLKLRKPGWVKQPSAMFMFSMVLLSYFLVTGGIIYDVIVEPPSIGSTTDEKGNSKPVAFMPYRVN GQYIMEGLASSFLFTMGGLGFVILDQVNKTMPRLNRILLLCMGFAAILISFFMCRVFMRMKLPGYLMS |
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