Gene
| Gene Model ID | pfu_aug1.0_3089.1_23173 |
|---|---|
| Locus | scaffold3089.1 : 34981 ... 37075 : - |
| To GenomeBrowser | scaffold3089.1:34981..37075 |
| Genes list of scaffold | scaffold3089.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3089.1_23173.t1 | 6 | 1 | LRR_1 | 24 | 33 | 1.5e-08 | 33.4 | 0.85 | 2100.0 | -0.5 |
| pfu_aug1.0_3089.1_23173.t1 | 2 | 1 | LRR_8 | 48 | 103 | 7.4e-11 | 41.6 | 4.4e-08 | 0.00011 | 21.9 |
| pfu_aug1.0_3089.1_23173.t1 | 3 | 1 | LRR_4 | 48 | 80 | 3.6e-09 | 36.0 | 0.00014 | 0.34 | 10.5 |
| pfu_aug1.0_3089.1_23173.t1 | 6 | 2 | LRR_1 | 48 | 63 | 1.5e-08 | 33.4 | 0.41 | 1000.0 | 0.5 |
| pfu_aug1.0_3089.1_23173.t1 | 6 | 3 | LRR_1 | 70 | 90 | 1.5e-08 | 33.4 | 0.00018 | 0.44 | 10.7 |
| pfu_aug1.0_3089.1_23173.t1 | 3 | 2 | LRR_4 | 83 | 103 | 3.6e-09 | 36.0 | 1.5e-05 | 0.037 | 13.6 |
| pfu_aug1.0_3089.1_23173.t1 | 6 | 4 | LRR_1 | 93 | 107 | 1.5e-08 | 33.4 | 0.00073 | 1.8 | 8.8 |
| pfu_aug1.0_3089.1_23173.t1 | 2 | 2 | LRR_8 | 108 | 149 | 7.4e-11 | 41.6 | 1.8e-08 | 4.5e-05 | 23.1 |
| pfu_aug1.0_3089.1_23173.t1 | 3 | 3 | LRR_4 | 115 | 149 | 3.6e-09 | 36.0 | 7.3e-07 | 0.0018 | 17.8 |
| pfu_aug1.0_3089.1_23173.t1 | 6 | 5 | LRR_1 | 116 | 132 | 1.5e-08 | 33.4 | 0.00013 | 0.31 | 11.2 |
| pfu_aug1.0_3089.1_23173.t1 | 6 | 6 | LRR_1 | 139 | 154 | 1.5e-08 | 33.4 | 0.056 | 140.0 | 3.1 |
Transcript
| Transcript ID | pfu_aug1.0_3089.1_23173.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3089.1_23173.t1 atgtctatagtgaaaaccatttcagaattctttacgaaaccaaaagcggaaccaaagacggagccaaaagaatttaatct ccaaaactgctatgagcttgttttgaaggaatatcttctgtcacttgaagttggacacacacaacgtttgcaaataaaca gcactagggttagtcacctacctaaggaggcgggtaggcttacacagattacggatctagatctgtccagaaaccttcta tgctggttaccagatgagctggaaaacctaaagatgttagaatttctaaacctttcacataataaattcaggctgttccc aagagtggtgaccaaactttctactttgaagtcactggatttgagcatgaatgatattacagttctaccctcagcaatgt taaacctggaaacgttaacgacactgaacctagagggaagtgaaattaaactgccggtgcccgggtgtgaaaggcgaact attccagaaatatttgacgctttgaaagtcagagtgatagagaatgaccgatgcaatatgtggtcaacctgtaaaccatt ttatgatgaaggtggtctaaaaagtctggtggatttatgtacggattgcattctgtataataagatagactatgaatcaa ggaaatatgtgccgcctgtagtgaaaacttacttgaccgaggaagatcggagttttccgagacctaaccatcaattgacc gattttcagaagtgtagtgtgtgcaagaagttctatactaccaaagagaaatttatccatcatgaatgtttttag |
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Protein
| Protein ID | pfu_aug1.0_3089.1_23173.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3089.1_23173.t1 MSIVKTISEFFTKPKAEPKTEPKEFNLQNCYELVLKEYLLSLEVGHTQRLQINSTRVSHLPKEAGRLTQITDLDLSRNLL CWLPDELENLKMLEFLNLSHNKFRLFPRVVTKLSTLKSLDLSMNDITVLPSAMLNLETLTTLNLEGSEIKLPVPGCERRT IPEIFDALKVRVIENDRCNMWSTCKPFYDEGGLKSLVDLCTDCILYNKIDYESRKYVPPVVKTYLTEEDRSFPRPNHQLT DFQKCSVCKKFYTTKEKFIHHECF |
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