Gene
| Gene Model ID | pfu_aug1.0_3089.1_23175 |
|---|---|
| Locus | scaffold3089.1 : 53455 ... 55805 : - |
| To GenomeBrowser | scaffold3089.1:53455..55805 |
| Genes list of scaffold | scaffold3089.1 |
| Synonym | pfu_aug2.0_1391.1_05013 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3089.1_23175.t1 | 2 | 1 | LRR_8 | 50 | 107 | 3.1e-15 | 55.6 | 2.0e-12 | 3.3e-09 | 36.3 |
| pfu_aug1.0_3089.1_23175.t1 | 3 | 1 | LRR_4 | 50 | 87 | 9.6e-15 | 53.8 | 2.2e-09 | 3.7e-06 | 26.4 |
| pfu_aug1.0_3089.1_23175.t1 | 5 | 1 | LRR_1 | 51 | 69 | 8.0e-11 | 40.4 | 0.087 | 140.0 | 3.1 |
| pfu_aug1.0_3089.1_23175.t1 | 5 | 2 | LRR_1 | 74 | 94 | 8.0e-11 | 40.4 | 0.00012 | 0.19 | 11.8 |
| pfu_aug1.0_3089.1_23175.t1 | 3 | 2 | LRR_4 | 76 | 121 | 9.6e-15 | 53.8 | 4.9e-09 | 8.1e-06 | 25.3 |
| pfu_aug1.0_3089.1_23175.t1 | 5 | 3 | LRR_1 | 96 | 109 | 8.0e-11 | 40.4 | 0.00064 | 1.1 | 9.6 |
| pfu_aug1.0_3089.1_23175.t1 | 2 | 2 | LRR_8 | 119 | 154 | 3.1e-15 | 55.6 | 4.5e-08 | 7.4e-05 | 22.4 |
| pfu_aug1.0_3089.1_23175.t1 | 3 | 3 | LRR_4 | 120 | 153 | 9.6e-15 | 53.8 | 2.1e-07 | 0.00035 | 20.1 |
| pfu_aug1.0_3089.1_23175.t1 | 5 | 4 | LRR_1 | 120 | 138 | 8.0e-11 | 40.4 | 0.00065 | 1.1 | 9.5 |
| pfu_aug1.0_3089.1_23175.t1 | 5 | 5 | LRR_1 | 142 | 160 | 8.0e-11 | 40.4 | 0.01 | 17.0 | 5.9 |
Transcript
| Transcript ID | pfu_aug1.0_3089.1_23175.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3089.1_23175.t1 atgtcgttatgggagggtttttcaagactgttttctaagcaagacagatatggcaatgggaaaatgaaatctaagacaga atatgagagtgtccaagattatcaggagacttatttggatgatttttttctatcactgaaagtagcaaaaatacaaagtt tgcaaataaatgacacaaaaataactcggctaccagcgtctttgggcaggtttacactcctctcagaattagatctttca cgaaacgctcttcggtgcttgcccgatgaaatgaaaaatctagcaaagctggaaattcttaacctttcccacaataagtt tttaatctttcccatcgtggtaaccaaaatttctgcgttgaaatcgctggatctgagtataaattatataacagttttac cctccgctatgcttaaacttacacagttatcgacgctgagcctagagggaaatgaaatcaaattaccaatacccgagtgc gaaaagcgaacaatagaagaaatatttgaagctttcaaattcggaggcaaagagagcgaacgacgcaacttgtggggcag ttggagaccatattatgatgaggcggcacaatgcagtgttaagagactgaccgatttgagtacggactgcattctttcta atgagatagactatcaatccggaaaccatgtacctccagcagtgaaaacttacttgaccgccacatttaacctatacccg aatctaatgaagtgtagtgtgtgtaagaagtactttactaccagacatatttttattcatcatgcatgttataaaactat atattga |
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Protein
| Protein ID | pfu_aug1.0_3089.1_23175.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3089.1_23175.t1 MSLWEGFSRLFSKQDRYGNGKMKSKTEYESVQDYQETYLDDFFLSLKVAKIQSLQINDTKITRLPASLGRFTLLSELDLS RNALRCLPDEMKNLAKLEILNLSHNKFLIFPIVVTKISALKSLDLSINYITVLPSAMLKLTQLSTLSLEGNEIKLPIPEC EKRTIEEIFEAFKFGGKESERRNLWGSWRPYYDEAAQCSVKRLTDLSTDCILSNEIDYQSGNHVPPAVKTYLTATFNLYP NLMKCSVCKKYFTTRHIFIHHACYKTIY |
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