Gene
| Gene Model ID | pfu_aug1.0_3094.1_30338 |
|---|---|
| Locus | scaffold3094.1 : 32536 ... 56579 : + |
| To GenomeBrowser | scaffold3094.1:32536..56579 |
| Genes list of scaffold | scaffold3094.1 |
| Synonym | pfu_aug2.0_9474.1_16381 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3094.1_30338.t1 | 5 | 1 | LRR_1 | 166 | 174 | 4.0e-06 | 26.1 | 0.68 | 1100.0 | 0.4 |
| pfu_aug1.0_3094.1_30338.t1 | 5 | 1 | LRR_6 | 167 | 182 | 6.1e-13 | 47.3 | 0.046 | 76.0 | 3.8 |
| pfu_aug1.0_3094.1_30338.t1 | 5 | 2 | LRR_6 | 188 | 210 | 6.1e-13 | 47.3 | 0.00022 | 0.36 | 11.0 |
| pfu_aug1.0_3094.1_30338.t1 | 5 | 2 | LRR_1 | 191 | 209 | 4.0e-06 | 26.1 | 0.05 | 83.0 | 3.8 |
| pfu_aug1.0_3094.1_30338.t1 | 5 | 3 | LRR_6 | 218 | 238 | 6.1e-13 | 47.3 | 0.0005 | 0.82 | 9.9 |
| pfu_aug1.0_3094.1_30338.t1 | 5 | 3 | LRR_1 | 219 | 230 | 4.0e-06 | 26.1 | 0.26 | 430.0 | 1.6 |
| pfu_aug1.0_3094.1_30338.t1 | 5 | 4 | LRR_6 | 244 | 266 | 6.1e-13 | 47.3 | 5.9e-06 | 0.0098 | 15.8 |
| pfu_aug1.0_3094.1_30338.t1 | 5 | 4 | LRR_1 | 247 | 265 | 4.0e-06 | 26.1 | 0.0006 | 0.99 | 9.6 |
| pfu_aug1.0_3094.1_30338.t1 | 5 | 5 | LRR_6 | 273 | 294 | 6.1e-13 | 47.3 | 0.0039 | 6.4 | 7.1 |
| pfu_aug1.0_3094.1_30338.t1 | 5 | 5 | LRR_1 | 275 | 287 | 4.0e-06 | 26.1 | 0.14 | 230.0 | 2.4 |
| pfu_aug1.0_3094.1_30338.t1 | 1 | 1 | EF-hand_7 | 367 | 420 | 2.2e-09 | 37.2 | 4.7e-12 | 7.7e-09 | 35.5 |
| pfu_aug1.0_3094.1_30338.t1 | 2 | 1 | EF-hand_1 | 367 | 391 | 4.4e-09 | 35.0 | 1.1e-07 | 0.00019 | 20.5 |
| pfu_aug1.0_3094.1_30338.t1 | 2 | 1 | EF-hand_6 | 367 | 391 | 9.6e-08 | 31.2 | 1.3e-07 | 0.00021 | 20.8 |
| pfu_aug1.0_3094.1_30338.t1 | 2 | 1 | EF-hand_8 | 369 | 387 | 7.2e-08 | 31.9 | 0.0075 | 12.0 | 5.5 |
| pfu_aug1.0_3094.1_30338.t1 | 2 | 2 | EF-hand_8 | 381 | 420 | 7.2e-08 | 31.9 | 1.0e-09 | 1.7e-06 | 27.5 |
| pfu_aug1.0_3094.1_30338.t1 | 2 | 2 | EF-hand_1 | 402 | 420 | 4.4e-09 | 35.0 | 5.5e-05 | 0.09 | 12.1 |
| pfu_aug1.0_3094.1_30338.t1 | 2 | 2 | EF-hand_6 | 408 | 423 | 9.6e-08 | 31.2 | 0.0029 | 4.7 | 7.3 |
Transcript
| Transcript ID | pfu_aug1.0_3094.1_30338.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3094.1_30338.t1 atggactggttattgactaggtgtgacgaggcggaggaggaagggtacgtctctgatggggcggaggcggatcaagaaga cgaggggtatgatgaagaggtggatccagaggtggatctgaatagaatgactatcagtcgggctagcagtcggaagtcgc gaccagaaagcagtggttctcgactggagaagtaccacgtatcagacagtgagagtgacgatgagacacgccctaaaccc ccacgggaggtcacatcagattatgactttacctctgtcgacattacagacgagaaagcttttgacacagacttggaggt cgaggaggcgacgtccacgtacgaccactcggggaggacgacgtacatagagggatgtaaaaaagtgggcgtggtcccag cctcctacttcttacgtcacatgcacgaccccaaactgagtatgaagcaccacgggctgggatcacatggcatgaaggct atagcaatgtcattagtaaatttatcagacaacagattaggggcccgttgtgcagaaacattgtctaaaatattgcaaca aaatactacgctaactcatgtacgcttgtcaggtaatgattttgatgacaaagctgcagtgcatattgcagatgcattac tacaaaatatatttttacggaaagtgaatttatcgtggaatggttttggcttagatggtgctatagctttaggggatgca ttaaaggttaactgtgtattagaagagctcaatgtatcaaataacagaataacaacagaaggttctgttttactcggtaa aggtttgtcagctaacgagactctacaggtgctaaagttgggtagaaatcctatgcagacagctggttgttatgcaattt gtgctgcaattctcagaaatccaaactgtacgttacgagaaatagatttctcagatatattggtgaacaaagatttcgag gacatattcaaacaagtacaagaacagcttccggacattaagatgaggcacggagggatggagccgccaatgaagccccg cgctcggatccaccccatgatcaaactgacaaactatatagagaaaaacaacttacgattggtggagtttttcaacaagt ttgacaaggacggcagtatgagtgttacgtacgaggaatttgaacagggtatagaggagactgggctaaaattaagtcat gaagaagtacagattttattgaaagagttggatagcgacggggacggagaaataaattacaggaaacttcatgaacaagt cacaaatatgggagcatga |
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Protein
| Protein ID | pfu_aug1.0_3094.1_30338.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3094.1_30338.t1 MDWLLTRCDEAEEEGYVSDGAEADQEDEGYDEEVDPEVDLNRMTISRASSRKSRPESSGSRLEKYHVSDSESDDETRPKP PREVTSDYDFTSVDITDEKAFDTDLEVEEATSTYDHSGRTTYIEGCKKVGVVPASYFLRHMHDPKLSMKHHGLGSHGMKA IAMSLVNLSDNRLGARCAETLSKILQQNTTLTHVRLSGNDFDDKAAVHIADALLQNIFLRKVNLSWNGFGLDGAIALGDA LKVNCVLEELNVSNNRITTEGSVLLGKGLSANETLQVLKLGRNPMQTAGCYAICAAILRNPNCTLREIDFSDILVNKDFE DIFKQVQEQLPDIKMRHGGMEPPMKPRARIHPMIKLTNYIEKNNLRLVEFFNKFDKDGSMSVTYEEFEQGIEETGLKLSH EEVQILLKELDSDGDGEINYRKLHEQVTNMGA |
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