Gene
| Gene Model ID | pfu_aug1.0_3094.1_30339 |
|---|---|
| Locus | scaffold3094.1 : 57147 ... 61835 : - |
| To GenomeBrowser | scaffold3094.1:57147..61835 |
| Genes list of scaffold | scaffold3094.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3094.1_30339.t1 | 1 | 1 | SelR | 50 | 168 | 6.89439e-43 | 145.2 | 0.0 | 8.50588e-43 | 145.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3094.1_30339.t1 | gi|50344842|ref|NP_001002094.1| | methionine-R-sulfoxide reductase B3 [Danio rerio] | 2.0e-40 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_3094.1_30339.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3094.1_30339.t1 atggtcgtgccctttgtaacgttaattggcgtgttacaaaacgtccaaatagagtactggatcatgttaatgctcacctt actagctgtatctgtctgtggtttggtggatggtcaagcagtgaacaaacagttgacctttacagatacagagctacagc agaggcttactcctatgcagtactacgtcactcagcaagatggaactgaaccgaaaaacagtggtaaatacctatacaac aaagatcagggaacgtacagctgtgttgtttgtggaaatccaatgtactcctctaaacataagtatgactccaagtcagg ttggccgtcattttatgacgttcttggtggagtggctacagtcaaagatttcacgcacggaatggtaagggacgaggttg tttgctcgaggtgtggcgcccaccatggtcacgtgtttaacgatggtccgccacctacgtacctgagatactgcatcaac tctgcagcaatgatgttcgtatcagaaaacagaagtcaaatgaaatcaaccatgtaa |
|
Protein
| Protein ID | pfu_aug1.0_3094.1_30339.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3094.1_30339.t1 MVVPFVTLIGVLQNVQIEYWIMLMLTLLAVSVCGLVDGQAVNKQLTFTDTELQQRLTPMQYYVTQQDGTEPKNSGKYLYN KDQGTYSCVVCGNPMYSSKHKYDSKSGWPSFYDVLGGVATVKDFTHGMVRDEVVCSRCGAHHGHVFNDGPPPTYLRYCIN SAAMMFVSENRSQMKSTM |
|