Gene
| Gene Model ID | pfu_aug1.0_3094.1_30341 |
|---|---|
| Locus | scaffold3094.1 : 72806 ... 87084 : + |
| To GenomeBrowser | scaffold3094.1:72806..87084 |
| Genes list of scaffold | scaffold3094.1 |
| Synonym | pfu_aug2.0_976.1_21304 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3094.1_30341.t1 | 1 | 1 | PAZ | 257 | 389 | 8.0e-35 | 119.0 | 8.7e-39 | 1.3e-34 | 118.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3094.1_30341.t1 | gi|296040396|dbj|BAJ07610.1| | piwi [Ephydatia fluviatilis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3094.1_30341.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3094.1_30341.t1 atgcctagtgctgctgcccctgccccagtaccggctgctggaccaccaacagccagcgggcgtgcctcgtacaggggtgg ggccaaggaggcgcggcctggaatggccacaggatcaggagatgtaccagaggaacaactggcggccctaaggatcggca caggggatactaaaggtgtgggtaggagtagggccgattacaggtattcagagccctgtacaaggcctgcccatatctcc gacaagagagggaccgctgggggtcaactaccattgctcaccaactacttccgtttggagagttcccctgactggcattt atatcagtatcatgtggattttaacccagtagtggattctaagaagatgaggatgggtcttctcatgtctcacgagaatc tgattggaaaaaccagggcgtttgatgggcagattctgtacctgccacataagcttcaggaaacggttacagaggtttac tctacgactaagcgtgacaatacccagatccgtattactatcacactgaccaacgaactaccccccaccagcccacaagt catacaggtcttcaatattatctttagacgtgtgctggctatgatcgacatgcagcagataggacggaattacttcaatc caagtctgtcagtagccataccccaacacaagctacaagtaatgccgggcttcattaccagcattttgaagtatgagcag gacaccttactgtgtgcagacatcagccacaagatccttcgttcagacacagtgctagatatcatgtacgatatgtataa ccaagctggagaccgtttctatgacgagtgtatcaagaagtttgttggatccatcgtactgaccagatacaacaacaaaa cctatcgatgtgatgatattgactgggaaaagagaccatctcatacattcaaactacgcaacggtgatgagatcacatat gcacagtactatgaaaagagttacggaataaaagttaatgacgtaaatcagcctttgctggttagtagacccaagaagaa agatattcgaatgggcagaacagagccaatctatctccttccagaactttgtgctttgactggacttagtgacgaagtta gagcagatttcaatgtaatgaaagatgtaggtgcacatacacgagtcgcccctgatggaaggacaaaaaccctacaaggc ttcattaatcaaataaacacgaaccagcaagtcagagcggagatgggtggatggaagctgaagttttctgacaatttggt gtctcttaattctcgcattttacctcaggagaaaatcgtgcagaagggagacactgctttaagctatcgtcaagaggatg ctgattggagcagggacatgagaggcaaacagctaattacagcagtaaacctgcaggactgggtgatcatatttacaaga cgcaacagtgctcaggcacaagacctggtacagacactgtccagagtgggacctccaatgggaatgagaatcaacggtcc tgtcgtgtatgttgcatgtgatgttaaaattcaggttctcccctggttcagtttgcaaattcaaacagccttcatggcat ttttttgccggattgcaaagcaattccggtctatagattga |
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Protein
| Protein ID | pfu_aug1.0_3094.1_30341.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3094.1_30341.t1 MPSAAAPAPVPAAGPPTASGRASYRGGAKEARPGMATGSGDVPEEQLAALRIGTGDTKGVGRSRADYRYSEPCTRPAHIS DKRGTAGGQLPLLTNYFRLESSPDWHLYQYHVDFNPVVDSKKMRMGLLMSHENLIGKTRAFDGQILYLPHKLQETVTEVY STTKRDNTQIRITITLTNELPPTSPQVIQVFNIIFRRVLAMIDMQQIGRNYFNPSLSVAIPQHKLQVMPGFITSILKYEQ DTLLCADISHKILRSDTVLDIMYDMYNQAGDRFYDECIKKFVGSIVLTRYNNKTYRCDDIDWEKRPSHTFKLRNGDEITY AQYYEKSYGIKVNDVNQPLLVSRPKKKDIRMGRTEPIYLLPELCALTGLSDEVRADFNVMKDVGAHTRVAPDGRTKTLQG FINQINTNQQVRAEMGGWKLKFSDNLVSLNSRILPQEKIVQKGDTALSYRQEDADWSRDMRGKQLITAVNLQDWVIIFTR RNSAQAQDLVQTLSRVGPPMGMRINGPVVYVACDVKIQVLPWFSLQIQTAFMAFFCRIAKQFRSID |
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